Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228713

Identifier: 21228713

GI number: 21228713

Start: 3108670

End: 3110133

Strand: Reverse

Name: 21228713

Synonym: MM_2611

Alternate gene names: NA

Gene position: 3110133-3108670 (Counterclockwise)

Preceding gene: 21228714

Following gene: 21228712

Centisome position: 75.92

GC content: 49.04

Gene sequence:

>1464_bases
TTGCCCATGAGTAACGAAGGTCGGGCTGTTGAGAAAGAAAAGATAAAATCTGCATATGATGTCGTGATTATAGGAGCAGG
ACCTGCAGGGATGTTTGCGGCTTACGAACTTGCAGCCGGAAAGATGGAAATTCTTGTTATTGATATGGGCAGGGACATTG
ATAAGCGCTCCTGCCCTATGAAAGCCCTTAGCTACTGCAAGCACTGTGCCCCGTGCGAGATAATGTGCGGGGTTGGAGGC
TGCGGGACATTTTCTGACGGGACACTTAACCTTCGGCCTGACATAGGAGGTGACCTGGCAGCCCTTACCGGAGACCAGAC
TGAAGCCTGGGAGCTGGTTGACAGGGTCGATAAGGTTTTCCTTAAATTCGGTGCACCCCAGACTGCCCTTCTTACAGAAG
GCCCGGAAGTAGAGGAATTAAAACGCAGGGCTGCTTCTGTCGGAGCCCGGTTTATAGAGATCAAACAGAGGCATATAGGC
TCGGACAATGCACCTGCACTCATCGGGCGCTTCAAACAGGATCTTGTTGATAAAGGAGTGGATTTCCTGATTGAAACCGA
AGTCCATGACCTTTTGATAGAAGGAAAGGAATGCAAAGGAGTTATACTCTCAGGCGGGAGGGTTATCCGCGCAAACTATG
TGCTCCTGTCTCCAGGAAGAAGGGGCTGCAACTGGGTTTCGGAAATGATAGAAAAACATGACCTGAAAGCCCGTTACGGC
GGAATTGACATAGGGGTCAGAGTCGAAGTCCCTGCTATTATTATGGACCCTGTTACTAAAATCAACCGTGACCCTAAATT
CCATATCCAGAGCCGCCGATATGACGACTTTGTAAGGACATTCTGCACCAACAGGCGCGGTTTTGTCGTGAAAGAAGAAT
ACGAGGACTTTATTGCAACAAACGGGCATTCCATGGCAAATAAGGAGTCAGAAAATACCAACTTTGCATTCCTTGTCCGT
ATAGAACTTACAGAACCCATGGAAAACACTACAAAATACGCCCGCTCAATTGCGAAACTCGCGACAACGATCGGAGGAGG
AAAACCAGTCCTGCAGCGCATGGGAGACCTGAGGCGCGGACGGCGGTCAACAAAAGAGCGCCTTGCCAGAAACCTGGTCA
TAAATACATTAAAAGACGTGACACCTGGCGATATCTCAATGGCTCTTCCTCACAGGATAGTCATGGACATAATTGAAGGC
CTTGAGACCTTAAACGAGATTATCCCCGGCGTTGCTTCGGACTCGACCCTGCTTTACGCTCCTGAAGTCAAGTTCTATGC
CATGCACCTGGACGTGGACCGCCATATGGAAACCAGCATCAAAAACCTCTTTGCAGCAGGAGACGGTGCAGGCCTCTCAA
GGGATATAGTAAATGCCGCTGCAACCGGAATTATGGCTGCAGAAGGGATTATGAAAAAAGCCGGAAAGGGTCAGGATATC
CAGGAAGAAGAAAACAGATTTTGA

Upstream 100 bases:

>100_bases
AAATAATGTGAAGTTCGCTGCATTTTATGAAAAAGTTTTTATTGATAAGATTAAGGAAATTAATAAGTTTTTCTGATGTT
TAATCAAAAACTAGGGGGAG

Downstream 100 bases:

>100_bases
AGCTCTGAGAATAGAAAAATTATGCTGCTGTTTTATTTAATTTTGTTAAAAAAGTTATTTAGCTTTGTTAGAAAAGGTTG
CGTTCCCATCTGAAATACCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MPMSNEGRAVEKEKIKSAYDVVIIGAGPAGMFAAYELAAGKMEILVIDMGRDIDKRSCPMKALSYCKHCAPCEIMCGVGG
CGTFSDGTLNLRPDIGGDLAALTGDQTEAWELVDRVDKVFLKFGAPQTALLTEGPEVEELKRRAASVGARFIEIKQRHIG
SDNAPALIGRFKQDLVDKGVDFLIETEVHDLLIEGKECKGVILSGGRVIRANYVLLSPGRRGCNWVSEMIEKHDLKARYG
GIDIGVRVEVPAIIMDPVTKINRDPKFHIQSRRYDDFVRTFCTNRRGFVVKEEYEDFIATNGHSMANKESENTNFAFLVR
IELTEPMENTTKYARSIAKLATTIGGGKPVLQRMGDLRRGRRSTKERLARNLVINTLKDVTPGDISMALPHRIVMDIIEG
LETLNEIIPGVASDSTLLYAPEVKFYAMHLDVDRHMETSIKNLFAAGDGAGLSRDIVNAAATGIMAAEGIMKKAGKGQDI
QEEENRF

Sequences:

>Translated_487_residues
MPMSNEGRAVEKEKIKSAYDVVIIGAGPAGMFAAYELAAGKMEILVIDMGRDIDKRSCPMKALSYCKHCAPCEIMCGVGG
CGTFSDGTLNLRPDIGGDLAALTGDQTEAWELVDRVDKVFLKFGAPQTALLTEGPEVEELKRRAASVGARFIEIKQRHIG
SDNAPALIGRFKQDLVDKGVDFLIETEVHDLLIEGKECKGVILSGGRVIRANYVLLSPGRRGCNWVSEMIEKHDLKARYG
GIDIGVRVEVPAIIMDPVTKINRDPKFHIQSRRYDDFVRTFCTNRRGFVVKEEYEDFIATNGHSMANKESENTNFAFLVR
IELTEPMENTTKYARSIAKLATTIGGGKPVLQRMGDLRRGRRSTKERLARNLVINTLKDVTPGDISMALPHRIVMDIIEG
LETLNEIIPGVASDSTLLYAPEVKFYAMHLDVDRHMETSIKNLFAAGDGAGLSRDIVNAAATGIMAAEGIMKKAGKGQDI
QEEENRF
>Mature_486_residues
PMSNEGRAVEKEKIKSAYDVVIIGAGPAGMFAAYELAAGKMEILVIDMGRDIDKRSCPMKALSYCKHCAPCEIMCGVGGC
GTFSDGTLNLRPDIGGDLAALTGDQTEAWELVDRVDKVFLKFGAPQTALLTEGPEVEELKRRAASVGARFIEIKQRHIGS
DNAPALIGRFKQDLVDKGVDFLIETEVHDLLIEGKECKGVILSGGRVIRANYVLLSPGRRGCNWVSEMIEKHDLKARYGG
IDIGVRVEVPAIIMDPVTKINRDPKFHIQSRRYDDFVRTFCTNRRGFVVKEEYEDFIATNGHSMANKESENTNFAFLVRI
ELTEPMENTTKYARSIAKLATTIGGGKPVLQRMGDLRRGRRSTKERLARNLVINTLKDVTPGDISMALPHRIVMDIIEGL
ETLNEIIPGVASDSTLLYAPEVKFYAMHLDVDRHMETSIKNLFAAGDGAGLSRDIVNAAATGIMAAEGIMKKAGKGQDIQ
EEENRF

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 53626; Mature: 53494

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSNEGRAVEKEKIKSAYDVVIIGAGPAGMFAAYELAAGKMEILVIDMGRDIDKRSCPM
CCCCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCH
KALSYCKHCAPCEIMCGVGGCGTFSDGTLNLRPDIGGDLAALTGDQTEAWELVDRVDKVF
HHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHH
LKFGAPQTALLTEGPEVEELKRRAASVGARFIEIKQRHIGSDNAPALIGRFKQDLVDKGV
HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
DFLIETEVHDLLIEGKECKGVILSGGRVIRANYVLLSPGRRGCNWVSEMIEKHDLKARYG
CEEEECCHHHHHCCCCCCCEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHCC
GIDIGVRVEVPAIIMDPVTKINRDPKFHIQSRRYDDFVRTFCTNRRGFVVKEEYEDFIAT
CEEEEEEEECCCEEECCHHHCCCCCCEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHC
NGHSMANKESENTNFAFLVRIELTEPMENTTKYARSIAKLATTIGGGKPVLQRMGDLRRG
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RRSTKERLARNLVINTLKDVTPGDISMALPHRIVMDIIEGLETLNEIIPGVASDSTLLYA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
PEVKFYAMHLDVDRHMETSIKNLFAAGDGAGLSRDIVNAAATGIMAAEGIMKKAGKGQDI
CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QEEENRF
CHHHCCC
>Mature Secondary Structure 
PMSNEGRAVEKEKIKSAYDVVIIGAGPAGMFAAYELAAGKMEILVIDMGRDIDKRSCPM
CCCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCH
KALSYCKHCAPCEIMCGVGGCGTFSDGTLNLRPDIGGDLAALTGDQTEAWELVDRVDKVF
HHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHH
LKFGAPQTALLTEGPEVEELKRRAASVGARFIEIKQRHIGSDNAPALIGRFKQDLVDKGV
HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
DFLIETEVHDLLIEGKECKGVILSGGRVIRANYVLLSPGRRGCNWVSEMIEKHDLKARYG
CEEEECCHHHHHCCCCCCCEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHCC
GIDIGVRVEVPAIIMDPVTKINRDPKFHIQSRRYDDFVRTFCTNRRGFVVKEEYEDFIAT
CEEEEEEEECCCEEECCHHHCCCCCCEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHC
NGHSMANKESENTNFAFLVRIELTEPMENTTKYARSIAKLATTIGGGKPVLQRMGDLRRG
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RRSTKERLARNLVINTLKDVTPGDISMALPHRIVMDIIEGLETLNEIIPGVASDSTLLYA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
PEVKFYAMHLDVDRHMETSIKNLFAAGDGAGLSRDIVNAAATGIMAAEGIMKKAGKGQDI
CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QEEENRF
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]