Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228629

Identifier: 21228629

GI number: 21228629

Start: 3013028

End: 3013693

Strand: Reverse

Name: 21228629

Synonym: MM_2527

Alternate gene names: NA

Gene position: 3013693-3013028 (Counterclockwise)

Preceding gene: 21228630

Following gene: 21228628

Centisome position: 73.57

GC content: 43.39

Gene sequence:

>666_bases
ATGTCTGAAGAAGATGCAGAAAAGCTGTTTTTGCAGGAAAAACCCACGCGTGCACTGCTATTCATAGGTTCTACAGGAAA
AACCTATGCTTCTGTTATTTCAAAGGAGATAGACTCGACATTTGCCCATACTACGAGGATTCTTTCGAAGATGGAACAGT
CCGGACTTATAAGATTCACATTCGAAGGGCGGATAAAATTTGTTGAACTTACGAAATACGGAGAGGAAGTCGAAGCTGCC
CTGAAAGATTTTCGGAATATAATTTCTGAAGAGTCTCCTTTAAGAAAAGAATACCTGACAGCAGAAGAAGCGGGCAAAGT
GGATAAAGTCAGGGAAAGCGAAGGAAAGGAATACAGAGAACACGAAGAATGGGAAGAAGAAAACGAAAGCGAAAAAGATC
TTGACCCTCTCAGCGCCGAAATCCTGGAAAAGGTAAGGAATCTGAGGAACAAAATAGAGGGCATCTACAGGGAAGCAGCC
GAGACAGGGCAGAGTAAGGAGATGCTTTCAAGAAAACTTGGCCCCAACAGCCGGGACATCAAAAAGCTGTATAATCAGAT
TGAAAACGCAGAAACTCCTGTTGACGAAACAGTGGTTTTAGCTCTGGAAGAAACAGAAGGGCTCCTTGAATCTTACCTGA
AGGGCTCAAAGCCGGAGAATGTTTGA

Upstream 100 bases:

>100_bases
GACATAAAAACTGTTCCAATAATATATAAACTATTAACGAATAATAAACGCCTGAGCTCAGATACAGAAATGATCCGCTA
AAAAACTCTATGTGATACTC

Downstream 100 bases:

>100_bases
TTCCCGCAGTACGATAGAGAAGAATGAATTGGCAGGAAAAAAATGAAAAAAGTTGTAACCCTCCAGCATATTTATGGAAA
AAACCGGGAAACGATGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein MarR

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSEEDAEKLFLQEKPTRALLFIGSTGKTYASVISKEIDSTFAHTTRILSKMEQSGLIRFTFEGRIKFVELTKYGEEVEAA
LKDFRNIISEESPLRKEYLTAEEAGKVDKVRESEGKEYREHEEWEEENESEKDLDPLSAEILEKVRNLRNKIEGIYREAA
ETGQSKEMLSRKLGPNSRDIKKLYNQIENAETPVDETVVLALEETEGLLESYLKGSKPENV

Sequences:

>Translated_221_residues
MSEEDAEKLFLQEKPTRALLFIGSTGKTYASVISKEIDSTFAHTTRILSKMEQSGLIRFTFEGRIKFVELTKYGEEVEAA
LKDFRNIISEESPLRKEYLTAEEAGKVDKVRESEGKEYREHEEWEEENESEKDLDPLSAEILEKVRNLRNKIEGIYREAA
ETGQSKEMLSRKLGPNSRDIKKLYNQIENAETPVDETVVLALEETEGLLESYLKGSKPENV
>Mature_220_residues
SEEDAEKLFLQEKPTRALLFIGSTGKTYASVISKEIDSTFAHTTRILSKMEQSGLIRFTFEGRIKFVELTKYGEEVEAAL
KDFRNIISEESPLRKEYLTAEEAGKVDKVRESEGKEYREHEEWEEENESEKDLDPLSAEILEKVRNLRNKIEGIYREAAE
TGQSKEMLSRKLGPNSRDIKKLYNQIENAETPVDETVVLALEETEGLLESYLKGSKPENV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25345; Mature: 25213

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEDAEKLFLQEKPTRALLFIGSTGKTYASVISKEIDSTFAHTTRILSKMEQSGLIRFT
CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
FEGRIKFVELTKYGEEVEAALKDFRNIISEESPLRKEYLTAEEAGKVDKVRESEGKEYRE
ECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCHHHHHHHCCHHHHH
HEEWEEENESEKDLDPLSAEILEKVRNLRNKIEGIYREAAETGQSKEMLSRKLGPNSRDI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
KKLYNQIENAETPVDETVVLALEETEGLLESYLKGSKPENV
HHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SEEDAEKLFLQEKPTRALLFIGSTGKTYASVISKEIDSTFAHTTRILSKMEQSGLIRFT
CCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
FEGRIKFVELTKYGEEVEAALKDFRNIISEESPLRKEYLTAEEAGKVDKVRESEGKEYRE
ECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCHHHHHHHCCHHHHH
HEEWEEENESEKDLDPLSAEILEKVRNLRNKIEGIYREAAETGQSKEMLSRKLGPNSRDI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
KKLYNQIENAETPVDETVVLALEETEGLLESYLKGSKPENV
HHHHHHHHCCCCCCCHHEEEEEHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA