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The map label for this gene is rpl7ae [H]

Identifier: 21228569

GI number: 21228569

Start: 2940768

End: 2941130

Strand: Reverse

Name: rpl7ae [H]

Synonym: MM_2467

Alternate gene names: 21228569

Gene position: 2941130-2940768 (Counterclockwise)

Preceding gene: 21228571

Following gene: 21228568

Centisome position: 71.8

GC content: 46.56

Gene sequence:

>363_bases
ATGGCACAATTAGCTAAATTCGATGTTCCTGAAGAACTTACAAACAAAGCACTTGAAGCTCTGGAACTTGCCAGAGACAC
AGGAAAGATTAAAAAGGGCACAAACGAAGCCACAAAAGCAATCGAAAGAGGCAATGCAAAGCTTGTCCTGATTGCCGAAG
ATATCGAGCCTGCAGAGATTGTCGCTCACATCGGCCCTCTTTCCGAAGAAAAGAAAGCTCCCTATATCTACATCAAGAAC
CAGAAAGACCTCGGCGCAGCCAGCGGACTTGGAGTCTCCTGTGCAACCGTGGCAATTGTAGATGCAGGCAAGGCAGCTGA
AATGATTCAGGACATCGCTCAGAAGCTTGACGCTCTTAAATAA

Upstream 100 bases:

>100_bases
CTTTTCTTAGAATTTGAATTTTCGATGTTGACAGATATGTGTTAAAAACCTATGATTGATGAAAAATTGCGAGATCCGCA
ATTTCGAAGGAGAAACTTAA

Downstream 100 bases:

>100_bases
CCCTGATAACAGAAGGTGCTGATTATGGCTGAAGAAAGCACAACAGGCGGCTTTGCTGCCGAAGTTATTGACGTTATCGG
GAACACAGGTATGCATGGTG

Product: 50S ribosomal protein L7Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIYIKN
QKDLGAASGLGVSCATVAIVDAGKAAEMIQDIAQKLDALK

Sequences:

>Translated_120_residues
MAQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIYIKN
QKDLGAASGLGVSCATVAIVDAGKAAEMIQDIAQKLDALK
>Mature_119_residues
AQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIYIKNQ
KDLGAASGLGVSCATVAIVDAGKAAEMIQDIAQKLDALK

Specific function: Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs [H]

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family [H]

Homologues:

Organism=Homo sapiens, GI4826860, Length=88, Percent_Identity=34.0909090909091, Blast_Score=70, Evalue=4e-13,
Organism=Homo sapiens, GI51317376, Length=88, Percent_Identity=34.0909090909091, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320809, Length=109, Percent_Identity=33.9449541284404, Blast_Score=71, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6319993, Length=90, Percent_Identity=37.7777777777778, Blast_Score=68, Evalue=4e-13,
Organism=Drosophila melanogaster, GI17864298, Length=111, Percent_Identity=35.1351351351351, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004038
- InterPro:   IPR018492
- InterPro:   IPR022481
- InterPro:   IPR004037
- InterPro:   IPR000948 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 12727; Mature: 12596

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS01082 RIBOSOMAL_L7AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHH
VAHIGPLSEEKKAPYIYIKNQKDLGAASGLGVSCATVAIVDAGKAAEMIQDIAQKLDALK
HHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQLAKFDVPEELTNKALEALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHH
VAHIGPLSEEKKAPYIYIKNQKDLGAASGLGVSCATVAIVDAGKAAEMIQDIAQKLDALK
HHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]