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The map label for this gene is rps28e [H]

Identifier: 21228568

GI number: 21228568

Start: 2940522

End: 2940743

Strand: Reverse

Name: rps28e [H]

Synonym: MM_2466

Alternate gene names: 21228568

Gene position: 2940743-2940522 (Counterclockwise)

Preceding gene: 21228569

Following gene: 21228567

Centisome position: 71.79

GC content: 48.65

Gene sequence:

>222_bases
ATGGCTGAAGAAAGCACAACAGGCGGCTTTGCTGCCGAAGTTATTGACGTTATCGGGAACACAGGTATGCATGGTGAAGC
AAGCCAGATCCAGTGCAGGGTTCTGGAAGGCAGAGACAAAGGTCGAGTAATCACAAGAAACTGTGTTGGCCCTGTCCGCA
TCGGTGATATTCTGATGCTTCTGGAAACGTCAAGAGAAGCAAAGAAACTGACTACCAGGTAA

Upstream 100 bases:

>100_bases
CGTGGCAATTGTAGATGCAGGCAAGGCAGCTGAAATGATTCAGGACATCGCTCAGAAGCTTGACGCTCTTAAATAACCCT
GATAACAGAAGGTGCTGATT

Downstream 100 bases:

>100_bases
AAATAGTAGGTGAAAATAAATGGAACAGAGGAAATGCTATTTTTGCGGACAGATGCTGGAGCCTGGTACCGGTAAACTCT
ACATCAAGAAAGACGGCTCC

Product: 30S ribosomal protein S28e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAEESTTGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILMLLETSREAKKLTTR

Sequences:

>Translated_73_residues
MAEESTTGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILMLLETSREAKKLTTR
>Mature_72_residues
AEESTTGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILMLLETSREAKKLTTR

Specific function: Unknown

COG id: COG2053

COG function: function code J; Ribosomal protein S28E/S33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S28e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000289
- InterPro:   IPR022836
- ProDom:   PD005541 [H]

Pfam domain/function: PF01200 Ribosomal_S28e [H]

EC number: NA

Molecular weight: Translated: 7888; Mature: 7757

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEESTTGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILML
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCHHHHHHH
LETSREAKKLTTR
HHCCCHHHCCCCC
>Mature Secondary Structure 
AEESTTGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILML
CCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCHHHHHHH
LETSREAKKLTTR
HHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]