Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228505

Identifier: 21228505

GI number: 21228505

Start: 2864249

End: 2865448

Strand: Reverse

Name: 21228505

Synonym: MM_2403

Alternate gene names: NA

Gene position: 2865448-2864249 (Counterclockwise)

Preceding gene: 21228506

Following gene: 21228504

Centisome position: 69.95

GC content: 48.33

Gene sequence:

>1200_bases
ATGTTCCCTAAAGAATTCAGATACAGTCCAAGGAATCTGATAGACCTTTTGACTGAGATGAAGGATACTTCCGAACTCAT
GGTAGACCTGGCGTACTCCGCAATGGTCTATGATGATGAGGACATTGCAGAAGAGGTGCTTAACCTTGAAGATAAAATGG
ATACTCTCGACTATCATATGAAAATGGCTGCAATGTTAAGCACACGCAGGGTCGATGAAGCTGAAGAACTCCTGGGAGTC
CTGAAGGTTGCCGCGTCCTCTGAGAATATAGCAAATGCTGCAGGTGATATTGCCAAAATTGTCCTTATGAATATGGGCAT
TCCTATGGAATTGAAGGTAGCCCTCAGAGAGGCAGAAGAAACCATAGTCAGGGCAACCGTTGCTGCAGAATCCGTAATGG
TCGGGCGTACTCTTGGAGACCTCGAACTTGACATAGAGACCGGGATGTGGATAATTGCAATCCGCAGAAGTGAAGACTGG
ATCTATGACCCTGATACTGACACCCGGATTCGCCAGGGAGACGTGTTATTTGCAAGAGGGCACGATGAGGGTGTCCCTCT
ATTCTTCCAGATGGCAACTACAAAAAAGTTCATCCCGAGGGAAATCGAGCACGATAAGGTCATAAAGGACCTCGAGCATG
CCGTGGACATAATCGTGGACATGAAAAATATGTCTGAACTTTCTGTAGGGCTTGCATACTCTGCCATCCTTTTTGATAAC
GAAGACATTGCATACGAAGTAAGTGCACTGGAATCAGAAATGGATTCCATGAAGTACGAACTCCAGCACTGGGTACTTGA
AACCGCAAAGCATGTTGATGATGTAAACATCCTAAGGGGAATACTGCACCTTGCCAGCGCCTCGGAAGCAATTTCAGACG
CCGCCTACGGGATAGCAGATACCGTGCTCAGGGACATAGAGCTCCACCCGATCATCACCCTTGCAGTCCGCAACTCGGAA
GAGGTGATCACACGGCTCCAGGTCGAAAAATGCTCCCCAATTGTAGGCAAGACCTTCTCAGAACTGAGACTGGAAACCGA
AACGGGACTGCATGTGATGGCGATAAAAAGAGCTGAACGCTGGGTCTATGCCCCCAAAAGCAACACCGTTGTCCAGGCAG
GGGACATGCTCATTGCCCGTGGCTCACGAATAGGAGAAGGTGCTCTGATAGAGATGTGCGAGTGCAAGTTACGCCAGTAA

Upstream 100 bases:

>100_bases
ATTATCAGGCTTCCCGACAGGGAATAATTCGAAAATTAATAATTACTATGAGGTATATACCCATAAATACCAACAATAAG
GTAGAGTTGATACATAGACC

Downstream 100 bases:

>100_bases
AAACCAGACTGTGATTCGGGACCGCACGGAATTGAAGATTTTCCGGGGATTGCAATATAATCGCAACAGTACGCCGTTCT
TTTCGGCAGAGTTGCGGCTC

Product: potassium channel protein

Products: NA

Alternate protein names: PhoU Family Protein; Potassium Channel; Potassium Channel Protein; TrkA Domain-Containing Protein; Phosphate Transport Regulator; TrkA-C Domain-Containing Protein; Potassium Channel Related Protein; TrkA-C; Potassium Channel-Related Protein; Potassium Channel-Like Protein

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHMKMAAMLSTRRVDEAEELLGV
LKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEETIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDW
IYDPDTDTRIRQGDVLFARGHDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN
EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIADTVLRDIELHPIITLAVRNSE
EVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAERWVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ

Sequences:

>Translated_399_residues
MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHMKMAAMLSTRRVDEAEELLGV
LKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEETIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDW
IYDPDTDTRIRQGDVLFARGHDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN
EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIADTVLRDIELHPIITLAVRNSE
EVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAERWVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ
>Mature_399_residues
MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHMKMAAMLSTRRVDEAEELLGV
LKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEETIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDW
IYDPDTDTRIRQGDVLFARGHDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN
EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIADTVLRDIELHPIITLAVRNSE
EVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAERWVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ

Specific function: Unknown

COG id: COG3273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44859; Mature: 44859

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHM
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEECCHHHHHHHHCHHHHHHHHHHHH
KMAAMLSTRRVDEAEELLGVLKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEE
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDWIYDPDTDTRIRQGDVLFARG
HHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCEECCCCCCEEECCCEEEECC
HDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN
CCCCCCEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIAD
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLRDIELHPIITLAVRNSEEVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAER
HHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHCCHHHHEEECCCCEEEEEEECCHH
WVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ
EEECCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHM
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEECCHHHHHHHHCHHHHHHHHHHHH
KMAAMLSTRRVDEAEELLGVLKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEE
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDWIYDPDTDTRIRQGDVLFARG
HHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCEECCCCCCEEECCCEEEECC
HDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN
CCCCCCEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIAD
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLRDIELHPIITLAVRNSEEVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAER
HHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHCCHHHHEEECCCCEEEEEEECCHH
WVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ
EEECCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA