| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228506
Identifier: 21228506
GI number: 21228506
Start: 2865600
End: 2866112
Strand: Reverse
Name: 21228506
Synonym: MM_2404
Alternate gene names: NA
Gene position: 2866112-2865600 (Counterclockwise)
Preceding gene: 21228507
Following gene: 21228505
Centisome position: 69.97
GC content: 45.03
Gene sequence:
>513_bases GTGCTTACCATAACATGCGTAATGGGCATTATTGTAGGGCAGATCCTCAATACAAGAGAAAACAGCCTGCTTTCTATGCC TGCTATTCTTATTCTTATCCCTTCTCTGGTCAAAATCGGTGGGGACACAGGAAGCATGCTTGGTGCAAGGCTTTCCTCTG CCTTTCACATGGGGCTTGGAGACAGGATCTACAGAAACCCTGTGGTGCACAACAGTGTTATTGCAGCTGCGATTGTGGGT TTCGTTTCTTCAATCTTTGTCAGTATGCTGGTTTTCCTTGCAAGCAAGCTTATGGGTTTCGGAATGCCTTTCATTACCCT TCTGGGAATCAGCCTTATAGCAGTCGTAATAGAACTCACCGTCGTATATTCAGCAACAGTTGCCATTGCCTTTGCTTCCC ACCGTTTCGGGATGGACCCTGACGATACTGTAATACCTTTTATAGCAAGTCTCGGAGACCTTGTAGGTGTTATCGGGATC TTCATAGCCCTGAATTTACTGAACATTTTATAA
Upstream 100 bases:
>100_bases TGCTCTTCCTGTCTGCAAAACTGGTGGTGATGCTCTGAAAAAATCCAGGAAACAGACCAGCTACTACACCGTAGAAGGCA TCATCCGGCGTGGGCTTCCC
Downstream 100 bases:
>100_bases ACCTGATATGACTTTAATAGTTCCATTTTTATTGAGTACATTATTATTCAAATTATCAGGCTTCCCGACAGGGAATAATT CGAAAATTAATAATTACTAT
Product: cation transporter
Products: NA
Alternate protein names: Divalent Cation Transporter; Transport System; Cation Transporter; Transporter Protein; Mg2+ Transporter; MgtE-Like Divalent Cation Transporter; MgtE Divalent Cation Transporter
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLTITCVMGIIVGQILNTRENSLLSMPAILILIPSLVKIGGDTGSMLGARLSSAFHMGLGDRIYRNPVVHNSVIAAAIVG FVSSIFVSMLVFLASKLMGFGMPFITLLGISLIAVVIELTVVYSATVAIAFASHRFGMDPDDTVIPFIASLGDLVGVIGI FIALNLLNIL
Sequences:
>Translated_170_residues MLTITCVMGIIVGQILNTRENSLLSMPAILILIPSLVKIGGDTGSMLGARLSSAFHMGLGDRIYRNPVVHNSVIAAAIVG FVSSIFVSMLVFLASKLMGFGMPFITLLGISLIAVVIELTVVYSATVAIAFASHRFGMDPDDTVIPFIASLGDLVGVIGI FIALNLLNIL >Mature_170_residues MLTITCVMGIIVGQILNTRENSLLSMPAILILIPSLVKIGGDTGSMLGARLSSAFHMGLGDRIYRNPVVHNSVIAAAIVG FVSSIFVSMLVFLASKLMGFGMPFITLLGISLIAVVIELTVVYSATVAIAFASHRFGMDPDDTVIPFIASLGDLVGVIGI FIALNLLNIL
Specific function: Unknown
COG id: COG1824
COG function: function code P; Permease, similar to cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17906; Mature: 17906
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTITCVMGIIVGQILNTRENSLLSMPAILILIPSLVKIGGDTGSMLGARLSSAFHMGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DRIYRNPVVHNSVIAAAIVGFVSSIFVSMLVFLASKLMGFGMPFITLLGISLIAVVIELT CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VVYSATVAIAFASHRFGMDPDDTVIPFIASLGDLVGVIGIFIALNLLNIL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLTITCVMGIIVGQILNTRENSLLSMPAILILIPSLVKIGGDTGSMLGARLSSAFHMGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DRIYRNPVVHNSVIAAAIVGFVSSIFVSMLVFLASKLMGFGMPFITLLGISLIAVVIELT CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VVYSATVAIAFASHRFGMDPDDTVIPFIASLGDLVGVIGIFIALNLLNIL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA