The gene/protein map for NC_008390 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228479

Identifier: 21228479

GI number: 21228479

Start: 2834393

End: 2834785

Strand: Reverse

Name: 21228479

Synonym: MM_2377

Alternate gene names: NA

Gene position: 2834785-2834393 (Counterclockwise)

Preceding gene: 21228487

Following gene: 21228478

Centisome position: 69.2

GC content: 38.42

Gene sequence:

>393_bases
ATGCAGTCATACGCAGGTTTTTTCAGAAGGCTGGTAGCTTCGATAATTGACATATTTATAATCATTCTTCTGATGGCATT
TATTCAGTTTGTAACAGGAATAAGGGAAGAAATATTTTACTACGTCCTGATAATTCTGTTTTCCTTGAGTTATTTTGCCT
ATCAGGAGAGTTCAGTCTATCAGGGGACGGTTGGAAAACAGGCAATGAATATCATCATAACCGATCTTGACGGGAGAAGA
ATCTCTTTTGCCTGTGCGACAAAAAGATTTATGGTGAAGGTTCTGGCATCTCTGCCTTTCTTTGCAGGTTTTTTGCCAGT
ATTTATCAATAAAAACAGGCAGGGAATCCACGATAAAATTGCAAAAACTCTTGTCATAGTCCGGGAAGACTGA

Upstream 100 bases:

>100_bases
TCAATTATCATAATGAAATCATTTTTACCACAACAGATAGATTTTTTAACAGAAACCTGCTTAGTAGATAAAATATATTA
GAAGAAGAACAGGGAAAAAT

Downstream 100 bases:

>100_bases
ATTTTGAGAAGGAGTTTTCTTTTTATATTAAGCCTTTATGTCTGATTTCCAGCCCTGTATTCCGCGCAGCCTTATTTTGA
GGCAATTATGATGATTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: RDD Domain-Containing Protein

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQSYAGFFRRLVASIIDIFIIILLMAFIQFVTGIREEIFYYVLIILFSLSYFAYQESSVYQGTVGKQAMNIIITDLDGRR
ISFACATKRFMVKVLASLPFFAGFLPVFINKNRQGIHDKIAKTLVIVRED

Sequences:

>Translated_130_residues
MQSYAGFFRRLVASIIDIFIIILLMAFIQFVTGIREEIFYYVLIILFSLSYFAYQESSVYQGTVGKQAMNIIITDLDGRR
ISFACATKRFMVKVLASLPFFAGFLPVFINKNRQGIHDKIAKTLVIVRED
>Mature_130_residues
MQSYAGFFRRLVASIIDIFIIILLMAFIQFVTGIREEIFYYVLIILFSLSYFAYQESSVYQGTVGKQAMNIIITDLDGRR
ISFACATKRFMVKVLASLPFFAGFLPVFINKNRQGIHDKIAKTLVIVRED

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14937; Mature: 14937

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYAGFFRRLVASIIDIFIIILLMAFIQFVTGIREEIFYYVLIILFSLSYFAYQESSVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGTVGKQAMNIIITDLDGRRISFACATKRFMVKVLASLPFFAGFLPVFINKNRQGIHDKI
CCHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AKTLVIVRED
HHHHHHEECC
>Mature Secondary Structure
MQSYAGFFRRLVASIIDIFIIILLMAFIQFVTGIREEIFYYVLIILFSLSYFAYQESSVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGTVGKQAMNIIITDLDGRRISFACATKRFMVKVLASLPFFAGFLPVFINKNRQGIHDKI
CCHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AKTLVIVRED
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA