| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228487
Identifier: 21228487
GI number: 21228487
Start: 2843385
End: 2844341
Strand: Reverse
Name: 21228487
Synonym: MM_2385
Alternate gene names: NA
Gene position: 2844341-2843385 (Counterclockwise)
Preceding gene: 21228491
Following gene: 21228479
Centisome position: 69.44
GC content: 45.98
Gene sequence:
>957_bases ATGAGACAGGACATAACTAACACTGACTATTCTCCGGGGTGTTGCATGTCTTTTGCAGATGAACGTGAACTGGCTGAAGT CAGGATGATTGAAGAGGGGTTAAGAAGTGCCTATGACGGGGATACAGAAGGGGTAATAAAAGCTTTTAGCAGCCTGAGGG ACTTTGCAGTATATCTGGTACATCTGGACATTACTGCGGAACACGAACTTGACGCAAAAGCTCTCATAATTGCAATGGGA GACATAGGCAGGGAGGCTGCACAAAAAAGAATGGAAGAAGCGTCAATATCCTCAGTTAGCTCTCTTGGAGAAGTTGCTGT TGAGGCTGTGTATGAGGAAAGGGAGTCTCTTGCATTAAAAGCGCTGTCTGTTCTCGGAAGCCTTGCACTCGAGTTTGGAG GAAAGGGCATGGATGCAGCCGCAAAAAGCGCAGCAGAATCTCTGGCAAATGTCGGGAAAGCTTCTTCAAAGAAAAAAATG GAGGTCCTTACAGGACTTTCAGAGGTCTATCTTATGCAGCTGTCCATGAAAGCAATGGAAGAAAAACTCTCCGTCACATG GAACATTTCTCTAAATCTTCTAGGAGAGATAGGAGTTTTATCAGCCGAAAAAGCAATGGAGAACAATGCTGTAGGGGCTG CAATCCTCTTTGAGACACTTGGCACTGCTGCCGCAAGGAAAAAGGATGAACTCAGGGTAAAAGACGTGATTCAGGCAATC GGAAAAACGGGGAGGGCATTTTCTCAGAAAGGCTCAAAAAATGCGCTTGTCCAGGCTGTGTGGGCTCTTGAAACTCTTCG GGTACTTGCGCTGGAATATTCGATGGAAAGTGCCGGAGCTGAAGGAAAAAAGGAACTGGAACTTCTGAGTACAGCAGGAA TTCTTGATGAGGAACAGAACCTGGAAAAAATCCAGGAAATAAAAGAATTCCACCGGCGCATCGTTGGAAGAACCTGA
Upstream 100 bases:
>100_bases GGGTTTTGATACCGTCCAGAAGAGATTCCTGCTCCAGTAGCCCTGATCCTGTAACCTTAAAGGATTTTAAGGAGAACAAA CAGGATAGGAAAGACTAATC
Downstream 100 bases:
>100_bases ATGATGAAGGTTTGACCAGTTGGCACTTCATACATGCAAAGAATAAAAGGAAAAGATTGGTGGGCGATTATATTTGTGTA AAAACAGTGATGTGCGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRQDITNTDYSPGCCMSFADERELAEVRMIEEGLRSAYDGDTEGVIKAFSSLRDFAVYLVHLDITAEHELDAKALIIAMG DIGREAAQKRMEEASISSVSSLGEVAVEAVYEERESLALKALSVLGSLALEFGGKGMDAAAKSAAESLANVGKASSKKKM EVLTGLSEVYLMQLSMKAMEEKLSVTWNISLNLLGEIGVLSAEKAMENNAVGAAILFETLGTAAARKKDELRVKDVIQAI GKTGRAFSQKGSKNALVQAVWALETLRVLALEYSMESAGAEGKKELELLSTAGILDEEQNLEKIQEIKEFHRRIVGRT
Sequences:
>Translated_318_residues MRQDITNTDYSPGCCMSFADERELAEVRMIEEGLRSAYDGDTEGVIKAFSSLRDFAVYLVHLDITAEHELDAKALIIAMG DIGREAAQKRMEEASISSVSSLGEVAVEAVYEERESLALKALSVLGSLALEFGGKGMDAAAKSAAESLANVGKASSKKKM EVLTGLSEVYLMQLSMKAMEEKLSVTWNISLNLLGEIGVLSAEKAMENNAVGAAILFETLGTAAARKKDELRVKDVIQAI GKTGRAFSQKGSKNALVQAVWALETLRVLALEYSMESAGAEGKKELELLSTAGILDEEQNLEKIQEIKEFHRRIVGRT >Mature_318_residues MRQDITNTDYSPGCCMSFADERELAEVRMIEEGLRSAYDGDTEGVIKAFSSLRDFAVYLVHLDITAEHELDAKALIIAMG DIGREAAQKRMEEASISSVSSLGEVAVEAVYEERESLALKALSVLGSLALEFGGKGMDAAAKSAAESLANVGKASSKKKM EVLTGLSEVYLMQLSMKAMEEKLSVTWNISLNLLGEIGVLSAEKAMENNAVGAAILFETLGTAAARKKDELRVKDVIQAI GKTGRAFSQKGSKNALVQAVWALETLRVLALEYSMESAGAEGKKELELLSTAGILDEEQNLEKIQEIKEFHRRIVGRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34432; Mature: 34432
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQDITNTDYSPGCCMSFADERELAEVRMIEEGLRSAYDGDTEGVIKAFSSLRDFAVYLV CCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHE HLDITAEHELDAKALIIAMGDIGREAAQKRMEEASISSVSSLGEVAVEAVYEERESLALK EEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSVLGSLALEFGGKGMDAAAKSAAESLANVGKASSKKKMEVLTGLSEVYLMQLSMKAME HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKLSVTWNISLNLLGEIGVLSAEKAMENNAVGAAILFETLGTAAARKKDELRVKDVIQAI HHHCEEEEEEEEEHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKTGRAFSQKGSKNALVQAVWALETLRVLALEYSMESAGAEGKKELELLSTAGILDEEQN HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH LEKIQEIKEFHRRIVGRT HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRQDITNTDYSPGCCMSFADERELAEVRMIEEGLRSAYDGDTEGVIKAFSSLRDFAVYLV CCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHE HLDITAEHELDAKALIIAMGDIGREAAQKRMEEASISSVSSLGEVAVEAVYEERESLALK EEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSVLGSLALEFGGKGMDAAAKSAAESLANVGKASSKKKMEVLTGLSEVYLMQLSMKAME HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKLSVTWNISLNLLGEIGVLSAEKAMENNAVGAAILFETLGTAAARKKDELRVKDVIQAI HHHCEEEEEEEEEHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKTGRAFSQKGSKNALVQAVWALETLRVLALEYSMESAGAEGKKELELLSTAGILDEEQN HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH LEKIQEIKEFHRRIVGRT HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA