Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228478

Identifier: 21228478

GI number: 21228478

Start: 2833426

End: 2834169

Strand: Reverse

Name: 21228478

Synonym: MM_2376

Alternate gene names: NA

Gene position: 2834169-2833426 (Counterclockwise)

Preceding gene: 21228479

Following gene: 21228476

Centisome position: 69.19

GC content: 47.58

Gene sequence:

>744_bases
ATGTCTATTTACGTCGATCAGCGCAGGTTTACAGATAAAAATTCTATCAGGACCAACCCGGTTTCATATGACTTTGACCA
GAGAAACCAGGCCTGGAGGAGTCCAGTTCAGGGTGATCCCTCTCAGGACTGCCCTGCCCGGAACACTCAGATTCGGGGCA
ACCCCCTGAGTATCCAGAAATCCATTCTAGCAGATTATCCAGACTTAACCTGCTCAGGGCAGGGCTCGGATTTGAAAGTA
TTCCTGGACATGGATGGAGTGCTTACTGATTTTACGGGCGCATGCGAGAAATTAAACGAACGTATGATGCTCTGGTATGC
TGCAGACAGAGAGCGTTTCTGGAAACATATTACTGCTGCTGGGACCGTTTTCTGGTCGGATATGTCCTGGATGGCTGGCG
GGAGAGAGCTTCACGGATTCCTTAAAAGTTCAGGCTTGCACCCCACAATTCTTTCCGCGCTCCCGAGTCCGGACAGAAAA
ATTGCAATGATCAACGCCAGAAAAGGAAAAATGGAGTGGTTGAAAAAAGAACTCGGGACTCCATACGCAAATAATGCAAT
TCTCTGTTTCCGCCCGGAAAAAGCTCTTCAATCAGGAAATTCCAGAATCCTCATAGATGATAACTCAAATAATACCAGTG
AATGGGAAGAAGCGGGAGGGACAGCTATACTGCACAGGAACGCGGATCGTACCATCAGGTGTCTTGGCAAGATCGTAAAA
GAAGGACAGGAAACCCGAATTTAA

Upstream 100 bases:

>100_bases
ATAAGTTAATTATATTATTTAGAGAGAGTAAATATTTTAATTATCTTTCATATAATAAAAGGAAATTATTTTCCGCCACA
CAGACTAAGGAAAGGTTGCC

Downstream 100 bases:

>100_bases
TTTTATGTTCTTTACGTTCCTGAGAACCAGCCCAAAAGCTAATAATCATTAGCTGGATCATTCAGGATAAATAGCTAATT
TTCGTTTTTATTATTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSIYVDQRRFTDKNSIRTNPVSYDFDQRNQAWRSPVQGDPSQDCPARNTQIRGNPLSIQKSILADYPDLTCSGQGSDLKV
FLDMDGVLTDFTGACEKLNERMMLWYAADRERFWKHITAAGTVFWSDMSWMAGGRELHGFLKSSGLHPTILSALPSPDRK
IAMINARKGKMEWLKKELGTPYANNAILCFRPEKALQSGNSRILIDDNSNNTSEWEEAGGTAILHRNADRTIRCLGKIVK
EGQETRI

Sequences:

>Translated_247_residues
MSIYVDQRRFTDKNSIRTNPVSYDFDQRNQAWRSPVQGDPSQDCPARNTQIRGNPLSIQKSILADYPDLTCSGQGSDLKV
FLDMDGVLTDFTGACEKLNERMMLWYAADRERFWKHITAAGTVFWSDMSWMAGGRELHGFLKSSGLHPTILSALPSPDRK
IAMINARKGKMEWLKKELGTPYANNAILCFRPEKALQSGNSRILIDDNSNNTSEWEEAGGTAILHRNADRTIRCLGKIVK
EGQETRI
>Mature_246_residues
SIYVDQRRFTDKNSIRTNPVSYDFDQRNQAWRSPVQGDPSQDCPARNTQIRGNPLSIQKSILADYPDLTCSGQGSDLKVF
LDMDGVLTDFTGACEKLNERMMLWYAADRERFWKHITAAGTVFWSDMSWMAGGRELHGFLKSSGLHPTILSALPSPDRKI
AMINARKGKMEWLKKELGTPYANNAILCFRPEKALQSGNSRILIDDNSNNTSEWEEAGGTAILHRNADRTIRCLGKIVKE
GQETRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27903; Mature: 27772

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYVDQRRFTDKNSIRTNPVSYDFDQRNQAWRSPVQGDPSQDCPARNTQIRGNPLSIQK
CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHH
SILADYPDLTCSGQGSDLKVFLDMDGVLTDFTGACEKLNERMMLWYAADRERFWKHITAA
HHHHCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHH
GTVFWSDMSWMAGGRELHGFLKSSGLHPTILSALPSPDRKIAMINARKGKMEWLKKELGT
CEEEECCCHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC
PYANNAILCFRPEKALQSGNSRILIDDNSNNTSEWEEAGGTAILHRNADRTIRCLGKIVK
CCCCCEEEEECCHHHHHCCCCEEEEECCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHH
EGQETRI
CCCCCCC
>Mature Secondary Structure 
SIYVDQRRFTDKNSIRTNPVSYDFDQRNQAWRSPVQGDPSQDCPARNTQIRGNPLSIQK
EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHH
SILADYPDLTCSGQGSDLKVFLDMDGVLTDFTGACEKLNERMMLWYAADRERFWKHITAA
HHHHCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHH
GTVFWSDMSWMAGGRELHGFLKSSGLHPTILSALPSPDRKIAMINARKGKMEWLKKELGT
CEEEECCCHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC
PYANNAILCFRPEKALQSGNSRILIDDNSNNTSEWEEAGGTAILHRNADRTIRCLGKIVK
CCCCCEEEEECCHHHHHCCCCEEEEECCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHH
EGQETRI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA