| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is argH [H]
Identifier: 21228409
GI number: 21228409
Start: 2762194
End: 2763669
Strand: Reverse
Name: argH [H]
Synonym: MM_2307
Alternate gene names: 21228409
Gene position: 2763669-2762194 (Counterclockwise)
Preceding gene: 21228411
Following gene: 21228408
Centisome position: 67.47
GC content: 46.95
Gene sequence:
>1476_bases ATGAGCAATATTTTAAGGAGAGGCAGGCTTGAAGCTGCCCAGGATGAGGAAATTTTACGCTACACCTCCTCTATGGAGGC CGACCGATGGATATTTAATGCCGACATAGTGGTTGACCTTGCCCATACGGTAATGCTGAGAGAGCAGGGCATTATAAAAG AAGAAGATTGCAGCAAAATCCTCAGCGGGCTTTTAAAGATAAGGGAAGAAGGCATGGAAAAGCTCGACTTCAGCTATGAA GACATACACATCTCGCTTGAATCCAGGCTCATCGACATGGTAGGAGAGGATGTGGGAGGCAGGATGCACTCCGGGCGTTC AAGAAACGATGAGGTTGCAACCTGCATCAGGCTGACTCTCAGGGAAGAACTTCTCGGGCTGCTTGAAGAAATATTTGCAT TAAGAAAAACTCTTGTCAGCCTCGCAGAAAAACACAGTGAAACCCTTATGCCTGGCTTTACCCATCTCCAGCACGCCCAG CCGACCACTCTGGCTCACCACCTCTGTGCACACGAATCTGCTCTAGGCAGGGATTTTGACAGGGTGCAGGACGCTTTTTC ACGGGTCAACCTCTGCCCGCTTGGGGCTGCTGCATTTGCATCTACCGGCTTTAACCTCAACAGGAAAAGGACTCAGGAAC TCCTGGGCTTTGAAGGGCTTCTGGAGAATTCTATGGATGCAGTCAGCAGCAGGGATTTCCTTATCGAATGCGCCTCTGTG TTTTCGAATCTCATGATAAACCTCAGCAGAATAGCTGAAGAACTTGTAATCTGGTCTTCATCAGAGTTCAATTTCATTGA GCTTGACGATATGTATGCTTCCACTTCTTCGATTATGCCCCAGAAGAAAAACCCGGATACTGCGGAATTAATGCGCGGAA AAACAGGAGTTTCTGTGGGCGCCCTTATGTCCCTGCTCACGATCTGTAAAGGCCTGCCCCTGAGTTACAATCGCGACCTG CAGGAAGCAACACCCAATATCTGGCGCTCGGTTGAAACTGTAAGGGCTTCTGTCAGGGTAATGGAAGGAATGGTCAAAAC CATGAAAGTCCATCCCGACGTGCTCGCAGCCGAATCAATAACGGGTTTTACAACAGCTACCGAACTTGCGGATACCTTTG TCAGGGAAACAGGAATCCCCTTCAGGACTGCCCACCAGATAGTAGGAATGCTTGCAAAGGAAAGGGAAAAGCCAACAATG GAAAAGATAGACTCTGCATCTGAGGTTGTTCTCGGGGAGTCGCTTTCAAGCAAAGGATTAACAGAAAATATGGTAAAGGA AGCTCTCAATCCTGAATCCAATATAAAAAGAAGAAAAATTCCTGGAGGCCCTGCTCCTGAGGAAATGAAAAATTATCTAT CAAAAAGGAAGACTGAGCTTGAACTGAACGCACAGGAAATTGCAACCCTGAAAGATATAATAGACTCGGCTTTTGAAAAT CTGCTTTCAGTGGTTGAAGAATACAGAAAAATCTGA
Upstream 100 bases:
>100_bases TATTTAAGCCGTTATTACACATTTAAAATAGATATTCTCACAACATATAATATTCACAATTAGATAGAGGACATATTTAA AATTATACAGAGGACACCCG
Downstream 100 bases:
>100_bases GTGCGGTGGTTTTAAGCGCAGAAAACACGTTTAATTTTAATATTATTTCAGACCTTTTAGTATTGCACAGATTATACAGA ATAAAACTGCATCATCGGAA
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSNILRRGRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKILSGLLKIREEGMEKLDFSYE DIHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTLREELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQ PTTLAHHLCAHESALGRDFDRVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASV FSNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTGVSVGALMSLLTICKGLPLSYNRDL QEATPNIWRSVETVRASVRVMEGMVKTMKVHPDVLAAESITGFTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTM EKIDSASEVVLGESLSSKGLTENMVKEALNPESNIKRRKIPGGPAPEEMKNYLSKRKTELELNAQEIATLKDIIDSAFEN LLSVVEEYRKI
Sequences:
>Translated_491_residues MSNILRRGRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKILSGLLKIREEGMEKLDFSYE DIHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTLREELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQ PTTLAHHLCAHESALGRDFDRVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASV FSNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTGVSVGALMSLLTICKGLPLSYNRDL QEATPNIWRSVETVRASVRVMEGMVKTMKVHPDVLAAESITGFTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTM EKIDSASEVVLGESLSSKGLTENMVKEALNPESNIKRRKIPGGPAPEEMKNYLSKRKTELELNAQEIATLKDIIDSAFEN LLSVVEEYRKI >Mature_490_residues SNILRRGRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKILSGLLKIREEGMEKLDFSYED IHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTLREELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQP TTLAHHLCAHESALGRDFDRVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASVF SNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTGVSVGALMSLLTICKGLPLSYNRDLQ EATPNIWRSVETVRASVRVMEGMVKTMKVHPDVLAAESITGFTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTME KIDSASEVVLGESLSSKGLTENMVKEALNPESNIKRRKIPGGPAPEEMKNYLSKRKTELELNAQEIATLKDIIDSAFENL LSVVEEYRKI
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=391, Percent_Identity=37.8516624040921, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI68303542, Length=391, Percent_Identity=37.8516624040921, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI68303547, Length=391, Percent_Identity=35.5498721227622, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI68303549, Length=391, Percent_Identity=35.0383631713555, Blast_Score=231, Evalue=2e-60, Organism=Escherichia coli, GI1790398, Length=462, Percent_Identity=35.0649350649351, Blast_Score=273, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6321806, Length=461, Percent_Identity=34.4902386117137, Blast_Score=268, Evalue=2e-72, Organism=Drosophila melanogaster, GI221473854, Length=441, Percent_Identity=33.7868480725624, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI78706858, Length=441, Percent_Identity=33.7868480725624, Blast_Score=246, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 54947; Mature: 54815
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNILRRGRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKI CCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHH LSGLLKIREEGMEKLDFSYEDIHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTL HHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH REELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQPTTLAHHLCAHESALGRDFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHH RVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASV HHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTGVSVG HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHH ALMSLLTICKGLPLSYNRDLQEATPNIWRSVETVRASVRVMEGMVKTMKVHPDVLAAESI HHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TGFTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTMEKIDSASEVVLGESLSSKGL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCCCC TENMVKEALNPESNIKRRKIPGGPAPEEMKNYLSKRKTELELNAQEIATLKDIIDSAFEN HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLSVVEEYRKI HHHHHHHHHCC >Mature Secondary Structure SNILRRGRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKI CCHHHHCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHH LSGLLKIREEGMEKLDFSYEDIHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTL HHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH REELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQPTTLAHHLCAHESALGRDFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHH RVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASV HHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTGVSVG HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHH ALMSLLTICKGLPLSYNRDLQEATPNIWRSVETVRASVRVMEGMVKTMKVHPDVLAAESI HHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TGFTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTMEKIDSASEVVLGESLSSKGL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCCCCCC TENMVKEALNPESNIKRRKIPGGPAPEEMKNYLSKRKTELELNAQEIATLKDIIDSAFEN HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLSVVEEYRKI HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA