Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228411

Identifier: 21228411

GI number: 21228411

Start: 2764567

End: 2765502

Strand: Reverse

Name: 21228411

Synonym: MM_2309

Alternate gene names: NA

Gene position: 2765502-2764567 (Counterclockwise)

Preceding gene: 21228414

Following gene: 21228409

Centisome position: 67.51

GC content: 42.2

Gene sequence:

>936_bases
ATGTTACTTACCGCTTTTACGCATTCGGCTGAGTATCTTTTAAAAACAGGTCCCGCAATAGTACTTGGGGTTATCCTTGC
CGAACTCCTTGTGAGCCTGGGGTGGTTCTACAAATTTGATTTTCTGGTAAAACCGGTTACAAACTACGCCAATCTCAGAA
AAGAATGTGGAGTGGGTTTCCTTACGGCTTTTGCGTCAACATCTTCAGCCAATGCTTCACTTAAAAGCATGTATGATGAA
GGAATCATAAAGGAAGAAGAACTGATCATAGCTTCGGTTTTGAATTCATTTCCTGCAATTGTCATGCACTGGAGATCCCT
GCTTCCGATACTTGTGCCCCTGCTCGGGACAACAGGGATCGTTTATGTCGGGCTGATAACTCTCGTAGGCTTTGTAAAAA
CCCTTATAGTTCTTATTGCCGGGCATTTCCTGCTTGAAAAAAAAGAAGTAAATTTTGAAGACCTTGAAAAGGAAAAGCCT
CCGGAATTAAAAACAGCATTTAAAGAAAGCCTGGTGACTTCGAGAAAAACGATAATCAGGATCTTTAAAGTGATGATCCC
GGTAACCATCCTTGTTTTTATTCTCACTGACCTTGGTATATTTGATTCCCTTGGCTCATATCTCAAGCCTATTTCGGACT
ACCTGCCTGTACCTGTAGAAGGGCTCCCTGTAATTGCAGCTCTTTTTGCAAGCCATCTTGCAGCCTATACTCTTGCAGCA
AACCTCATGGAACAGGGAATTTTAACCGGCATAGAAGTCATAATCGTCCTCCTGGTAGGCAATATAGTAACAAGCCTCGG
CTCACTGAGAATTTATGTCCCTCATTACGTCGGGATCTTCGGCCCCAGAATAGGGATGAAAACCATTTTGATTTCCCAGA
CCCTCAGGGTATTTGTTATGATAGGAATTACAGGGTTCATTTTAATAGTGTTTTAA

Upstream 100 bases:

>100_bases
AAACAATTTTACTGGAGAATTAAACAATTTTACTGGAGAATTAAATAATTACAATTTAATTTAGAAAAATTAATAAACAT
TAATACTGCAATCAAATTGA

Downstream 100 bases:

>100_bases
AGTGAAAAAAGGACATGCTAAAAGCAGATAAAAGTAAACATTATAAAAATATAACGTAAAAAGAAAAGCCTTTTACGGTT
TTGCCCTGATTTTTCGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MLLTAFTHSAEYLLKTGPAIVLGVILAELLVSLGWFYKFDFLVKPVTNYANLRKECGVGFLTAFASTSSANASLKSMYDE
GIIKEEELIIASVLNSFPAIVMHWRSLLPILVPLLGTTGIVYVGLITLVGFVKTLIVLIAGHFLLEKKEVNFEDLEKEKP
PELKTAFKESLVTSRKTIIRIFKVMIPVTILVFILTDLGIFDSLGSYLKPISDYLPVPVEGLPVIAALFASHLAAYTLAA
NLMEQGILTGIEVIIVLLVGNIVTSLGSLRIYVPHYVGIFGPRIGMKTILISQTLRVFVMIGITGFILIVF

Sequences:

>Translated_311_residues
MLLTAFTHSAEYLLKTGPAIVLGVILAELLVSLGWFYKFDFLVKPVTNYANLRKECGVGFLTAFASTSSANASLKSMYDE
GIIKEEELIIASVLNSFPAIVMHWRSLLPILVPLLGTTGIVYVGLITLVGFVKTLIVLIAGHFLLEKKEVNFEDLEKEKP
PELKTAFKESLVTSRKTIIRIFKVMIPVTILVFILTDLGIFDSLGSYLKPISDYLPVPVEGLPVIAALFASHLAAYTLAA
NLMEQGILTGIEVIIVLLVGNIVTSLGSLRIYVPHYVGIFGPRIGMKTILISQTLRVFVMIGITGFILIVF
>Mature_311_residues
MLLTAFTHSAEYLLKTGPAIVLGVILAELLVSLGWFYKFDFLVKPVTNYANLRKECGVGFLTAFASTSSANASLKSMYDE
GIIKEEELIIASVLNSFPAIVMHWRSLLPILVPLLGTTGIVYVGLITLVGFVKTLIVLIAGHFLLEKKEVNFEDLEKEKP
PELKTAFKESLVTSRKTIIRIFKVMIPVTILVFILTDLGIFDSLGSYLKPISDYLPVPVEGLPVIAALFASHLAAYTLAA
NLMEQGILTGIEVIIVLLVGNIVTSLGSLRIYVPHYVGIFGPRIGMKTILISQTLRVFVMIGITGFILIVF

Specific function: Unknown

COG id: COG3366

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34075; Mature: 34075

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTAFTHSAEYLLKTGPAIVLGVILAELLVSLGWFYKFDFLVKPVTNYANLRKECGVGF
CEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LTAFASTSSANASLKSMYDEGIIKEEELIIASVLNSFPAIVMHWRSLLPILVPLLGTTGI
HHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VYVGLITLVGFVKTLIVLIAGHFLLEKKEVNFEDLEKEKPPELKTAFKESLVTSRKTIIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IFKVMIPVTILVFILTDLGIFDSLGSYLKPISDYLPVPVEGLPVIAALFASHLAAYTLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
NLMEQGILTGIEVIIVLLVGNIVTSLGSLRIYVPHYVGIFGPRIGMKTILISQTLRVFVM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IGITGFILIVF
HHHHHHHHHCC
>Mature Secondary Structure
MLLTAFTHSAEYLLKTGPAIVLGVILAELLVSLGWFYKFDFLVKPVTNYANLRKECGVGF
CEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LTAFASTSSANASLKSMYDEGIIKEEELIIASVLNSFPAIVMHWRSLLPILVPLLGTTGI
HHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VYVGLITLVGFVKTLIVLIAGHFLLEKKEVNFEDLEKEKPPELKTAFKESLVTSRKTIIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IFKVMIPVTILVFILTDLGIFDSLGSYLKPISDYLPVPVEGLPVIAALFASHLAAYTLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
NLMEQGILTGIEVIIVLLVGNIVTSLGSLRIYVPHYVGIFGPRIGMKTILISQTLRVFVM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IGITGFILIVF
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]