| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228363
Identifier: 21228363
GI number: 21228363
Start: 2686134
End: 2686940
Strand: Reverse
Name: 21228363
Synonym: MM_2261
Alternate gene names: NA
Gene position: 2686940-2686134 (Counterclockwise)
Preceding gene: 21228364
Following gene: 21228362
Centisome position: 65.59
GC content: 40.89
Gene sequence:
>807_bases GTGTTAAAAATGACGGAGAGTCCGAACGAGACAAAGCTAGTAAACTTTGCTATGGCCAACGGTACTCGAAGGAAGATAAT TAACTTCCTGGCGGACGGTTATAGAAGTACCGGGGAAATAGGAGAGATAGTTGAGAAGGTAGCGCTTGACTTTCATCTCA AGATTCTCAAAGATGCGGGCCTTATCGAGCTAGAAGAAGAAACTGTAAAGTTAAGTGAGTACGGAAAGAATTTTCTGAAA GGTAAAAAAGAGACAAATCCTGAAGAAACCACTGATTTCTCCCAGTCAAAACCAATAGAGATTGTAAGTATCAGACAGGT TTTGCCCTGCATAGCTGATGCCTCAAGACTCAGGATAAGTTCAAATATAACCCCACCACCTGGTAGAGTTTTGAAACTCC TTGAACCTCTCTTTCAAAGAAGTAGTTATTCAGATAGAAAAAATAGCTTGATAATTCAAAAAGGAGAAATCATCACAACT ATTTACGGTAGTGGGAAAGTCTCTATCAGAATGGTCAAAAACGAAAACGAAGCTAAAGAAGAACTTGAAAGACTGAAGAG TATTATCAATGAGGCTATTGCAAAAGGTGAAGCTCCAGCCCCCAGAGAAAAGGTAAAGGTTAATCTTATGGAGATATATA AACACCTGCCCCAAACCAACTGTGGCAGATGTGGCGAGCAGGGATGTTACAGCTTTGCCATCAAGCTTATGGCCAGACAG GCAGCTCTGGAATTGTGTACACCCCTTAAAGAGCCGGAATACGCAAATAATCAGGAGCATCTTGAGGTTCTGGTTAATTA CATCTAA
Upstream 100 bases:
>100_bases CATAGAGATTTCTTCATCAGGTTGTGGAAAATGAGTTGTGATCAGAGCCTGTAAGCAAGGTGTACGCCTTAAGAAATTAC CTGGCAGAAATAACCTCCTG
Downstream 100 bases:
>100_bases ACTATTAATAAAATATATCTTGTTAGGAGGAAATTTGAAGACACTTACTATAGTGCTCACCGATGGCCCTTATATTTCAG AATATGCTGAAATCGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Fe-S Cluster Domain Protein; Fe-S Cluster
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAGLIELEEETVKLSEYGKNFLK GKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRISSNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITT IYGSGKVSIRMVKNENEAKEELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ AALELCTPLKEPEYANNQEHLEVLVNYI
Sequences:
>Translated_268_residues MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAGLIELEEETVKLSEYGKNFLK GKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRISSNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITT IYGSGKVSIRMVKNENEAKEELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ AALELCTPLKEPEYANNQEHLEVLVNYI >Mature_268_residues MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAGLIELEEETVKLSEYGKNFLK GKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRISSNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITT IYGSGKVSIRMVKNENEAKEELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ AALELCTPLKEPEYANNQEHLEVLVNYI
Specific function: Unknown
COG id: COG4871
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30184; Mature: 30184
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAG CCCCCCCCCCHHEEEEHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC LIELEEETVKLSEYGKNFLKGKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRIS CEEEHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEC SNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITTIYGSGKVSIRMVKNENEAKE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEECCCCHHHH ELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AALELCTPLKEPEYANNQEHLEVLVNYI HHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAG CCCCCCCCCCHHEEEEHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC LIELEEETVKLSEYGKNFLKGKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRIS CEEEHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEC SNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITTIYGSGKVSIRMVKNENEAKE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEECCCCHHHH ELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AALELCTPLKEPEYANNQEHLEVLVNYI HHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA