Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228363

Identifier: 21228363

GI number: 21228363

Start: 2686134

End: 2686940

Strand: Reverse

Name: 21228363

Synonym: MM_2261

Alternate gene names: NA

Gene position: 2686940-2686134 (Counterclockwise)

Preceding gene: 21228364

Following gene: 21228362

Centisome position: 65.59

GC content: 40.89

Gene sequence:

>807_bases
GTGTTAAAAATGACGGAGAGTCCGAACGAGACAAAGCTAGTAAACTTTGCTATGGCCAACGGTACTCGAAGGAAGATAAT
TAACTTCCTGGCGGACGGTTATAGAAGTACCGGGGAAATAGGAGAGATAGTTGAGAAGGTAGCGCTTGACTTTCATCTCA
AGATTCTCAAAGATGCGGGCCTTATCGAGCTAGAAGAAGAAACTGTAAAGTTAAGTGAGTACGGAAAGAATTTTCTGAAA
GGTAAAAAAGAGACAAATCCTGAAGAAACCACTGATTTCTCCCAGTCAAAACCAATAGAGATTGTAAGTATCAGACAGGT
TTTGCCCTGCATAGCTGATGCCTCAAGACTCAGGATAAGTTCAAATATAACCCCACCACCTGGTAGAGTTTTGAAACTCC
TTGAACCTCTCTTTCAAAGAAGTAGTTATTCAGATAGAAAAAATAGCTTGATAATTCAAAAAGGAGAAATCATCACAACT
ATTTACGGTAGTGGGAAAGTCTCTATCAGAATGGTCAAAAACGAAAACGAAGCTAAAGAAGAACTTGAAAGACTGAAGAG
TATTATCAATGAGGCTATTGCAAAAGGTGAAGCTCCAGCCCCCAGAGAAAAGGTAAAGGTTAATCTTATGGAGATATATA
AACACCTGCCCCAAACCAACTGTGGCAGATGTGGCGAGCAGGGATGTTACAGCTTTGCCATCAAGCTTATGGCCAGACAG
GCAGCTCTGGAATTGTGTACACCCCTTAAAGAGCCGGAATACGCAAATAATCAGGAGCATCTTGAGGTTCTGGTTAATTA
CATCTAA

Upstream 100 bases:

>100_bases
CATAGAGATTTCTTCATCAGGTTGTGGAAAATGAGTTGTGATCAGAGCCTGTAAGCAAGGTGTACGCCTTAAGAAATTAC
CTGGCAGAAATAACCTCCTG

Downstream 100 bases:

>100_bases
ACTATTAATAAAATATATCTTGTTAGGAGGAAATTTGAAGACACTTACTATAGTGCTCACCGATGGCCCTTATATTTCAG
AATATGCTGAAATCGCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Fe-S Cluster Domain Protein; Fe-S Cluster

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAGLIELEEETVKLSEYGKNFLK
GKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRISSNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITT
IYGSGKVSIRMVKNENEAKEELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ
AALELCTPLKEPEYANNQEHLEVLVNYI

Sequences:

>Translated_268_residues
MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAGLIELEEETVKLSEYGKNFLK
GKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRISSNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITT
IYGSGKVSIRMVKNENEAKEELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ
AALELCTPLKEPEYANNQEHLEVLVNYI
>Mature_268_residues
MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAGLIELEEETVKLSEYGKNFLK
GKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRISSNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITT
IYGSGKVSIRMVKNENEAKEELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ
AALELCTPLKEPEYANNQEHLEVLVNYI

Specific function: Unknown

COG id: COG4871

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30184; Mature: 30184

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAG
CCCCCCCCCCHHEEEEHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
LIELEEETVKLSEYGKNFLKGKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRIS
CEEEHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEC
SNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITTIYGSGKVSIRMVKNENEAKE
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEECCCCHHHH
ELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AALELCTPLKEPEYANNQEHLEVLVNYI
HHHHHHCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLKMTESPNETKLVNFAMANGTRRKIINFLADGYRSTGEIGEIVEKVALDFHLKILKDAG
CCCCCCCCCCHHEEEEHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
LIELEEETVKLSEYGKNFLKGKKETNPEETTDFSQSKPIEIVSIRQVLPCIADASRLRIS
CEEEHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEC
SNITPPPGRVLKLLEPLFQRSSYSDRKNSLIIQKGEIITTIYGSGKVSIRMVKNENEAKE
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEECCCCHHHH
ELERLKSIINEAIAKGEAPAPREKVKVNLMEIYKHLPQTNCGRCGEQGCYSFAIKLMARQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AALELCTPLKEPEYANNQEHLEVLVNYI
HHHHHHCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA