| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228362
Identifier: 21228362
GI number: 21228362
Start: 2685716
End: 2686159
Strand: Reverse
Name: 21228362
Synonym: MM_2260
Alternate gene names: NA
Gene position: 2686159-2685716 (Counterclockwise)
Preceding gene: 21228363
Following gene: 21228361
Centisome position: 65.57
GC content: 39.86
Gene sequence:
>444_bases TTGAGGTTCTGGTTAATTACATCTAAACTATTAATAAAATATATCTTGTTAGGAGGAAATTTGAAGACACTTACTATAGT GCTCACCGATGGCCCTTATATTTCAGAATATGCTGAAATCGCCTCTAAACTCGCTGAAGAAGCACTTAAACAATATCAGG TGAACATATTCCTTTACCTGGATGCAGTGCATATCCCTAAAAAAAGCCAAAACCCTTCATTTTTTAATAATGTGGGCGAA CTTTTCACCGAGCTGGCAGAGAAAGGAGCCATCATCAGAGCCTGTGCAAGATGTGCTGCTGCACGCGGCTACCTGGCAGA AGAGGACAATACTCTGAAAGGAAGTAACTGTGAGGATTATCTCACCGGGATAAAAATTTCCAGTCTTTATGAACTCTCAG AAATGCTGAAAAAGAGTGACAGGGTAATCTCACTGTCAAGATAA
Upstream 100 bases:
>100_bases GGATGTTACAGCTTTGCCATCAAGCTTATGGCCAGACAGGCAGCTCTGGAATTGTGTACACCCCTTAAAGAGCCGGAATA CGCAAATAATCAGGAGCATC
Downstream 100 bases:
>100_bases ACCACCAAAAAGAGGTCTAATGATGAAATCGGTTTTCTGTCTGCTGGATACTGCCCCATACGGAAGTGAAAAAGCCTTTG GAGCATTGAATGCGGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRFWLITSKLLIKYILLGGNLKTLTIVLTDGPYISEYAEIASKLAEEALKQYQVNIFLYLDAVHIPKKSQNPSFFNNVGE LFTELAEKGAIIRACARCAAARGYLAEEDNTLKGSNCEDYLTGIKISSLYELSEMLKKSDRVISLSR
Sequences:
>Translated_147_residues MRFWLITSKLLIKYILLGGNLKTLTIVLTDGPYISEYAEIASKLAEEALKQYQVNIFLYLDAVHIPKKSQNPSFFNNVGE LFTELAEKGAIIRACARCAAARGYLAEEDNTLKGSNCEDYLTGIKISSLYELSEMLKKSDRVISLSR >Mature_147_residues MRFWLITSKLLIKYILLGGNLKTLTIVLTDGPYISEYAEIASKLAEEALKQYQVNIFLYLDAVHIPKKSQNPSFFNNVGE LFTELAEKGAIIRACARCAAARGYLAEEDNTLKGSNCEDYLTGIKISSLYELSEMLKKSDRVISLSR
Specific function: Unknown
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0989 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 16505; Mature: 16505
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFWLITSKLLIKYILLGGNLKTLTIVLTDGPYISEYAEIASKLAEEALKQYQVNIFLYL CEEEEHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE DAVHIPKKSQNPSFFNNVGELFTELAEKGAIIRACARCAAARGYLAEEDNTLKGSNCEDY EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH LTGIKISSLYELSEMLKKSDRVISLSR HHCCHHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MRFWLITSKLLIKYILLGGNLKTLTIVLTDGPYISEYAEIASKLAEEALKQYQVNIFLYL CEEEEHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE DAVHIPKKSQNPSFFNNVGELFTELAEKGAIIRACARCAAARGYLAEEDNTLKGSNCEDY EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH LTGIKISSLYELSEMLKKSDRVISLSR HHCCHHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9151968; 11930014 [H]