Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228364

Identifier: 21228364

GI number: 21228364

Start: 2687244

End: 2688041

Strand: Reverse

Name: 21228364

Synonym: MM_2262

Alternate gene names: NA

Gene position: 2688041-2687244 (Counterclockwise)

Preceding gene: 21228365

Following gene: 21228363

Centisome position: 65.62

GC content: 42.48

Gene sequence:

>798_bases
GTGCCCGGAAATCCTAATGAAATAAAACTGGTAAACAATGCTATGTCCAATGTTACCCGACGGAAGATAATGAACTTTTT
ATCGGCAGGAGACAAAAGTGCTGAAGAAATCGGGGGAGAAGTGGGAAAGACTATGCTTGATTTCCATCTAAAACTCCTTC
AACAGGCAAGCCTGATTGAGATTGAAGAAGGGACTGTGAGACTGAGCGAATATGGCAGAAATTTCCTTAAAGAGAAAGAG
GAGAAAGGTGCAGATAAAACTGCAGATATTTCTCAGGCAAAACCAATAGAGATTACTGAGGTCAGACAGCTTTTGCCCTG
TATAGCCGATTCCTCAAAGTTCAGGGTAATTGCAAATATAGCCCCTCCTCTAGGTGGAACTCTCAAGGTTCTTGAACCAC
TCTTTCCCAGAGGCAAATATTCGGACAAAATAGGCGCTCTGATAATTCAAAAAGGAGAAATTATTACAACTGTTTACGGC
ACTGGAAAGGTGACCATGACAATGATAAAAAGTGAGGCGGAAGCCAGAGAATCTCTCCAGAGCCTTAAAAATACTATCAA
TGAAGCAATTGCAAAAGGTGTTGCTCCAGCACCAAGAGAAAAAGTCAGGGTTGAACCTATGGAGATCTACAAATACCTGC
CTCAGACCAACTGTGGCAAATGTGGTGAACAGAGCTGTTATACCTTTGCAATAAAGCTTATGGGAGGAGAGATCACTCTG
GACAAATGCACACCTCTAAAAGAACCGGGCTATGCAACAAACCTGGAGCATCTGCAAGTCCTTAGTGCATATATCTGA

Upstream 100 bases:

>100_bases
TATTGATTAAGAGAATTGAATTTCATTTTTGGAAGAAGAACGCCTGATATTATTTTGTCAAAACATCAGTTAAATTTTTG
TAACCTTCGCAGGTGGTAAA

Downstream 100 bases:

>100_bases
TTAGGTTTTATGAAATTCATCTGATTGGAGCACATTAAAACACCTTGATTATAGTGCTCATTGATAGCTCTTTATCATAC
TCCAGATAGGTTAAATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Fe-S Cluster Domain Protein; Fe-S Cluster

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIEIEEGTVRLSEYGRNFLKEKE
EKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANIAPPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYG
TGKVTMTMIKSEAEARESLQSLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL
DKCTPLKEPGYATNLEHLQVLSAYI

Sequences:

>Translated_265_residues
MPGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIEIEEGTVRLSEYGRNFLKEKE
EKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANIAPPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYG
TGKVTMTMIKSEAEARESLQSLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL
DKCTPLKEPGYATNLEHLQVLSAYI
>Mature_264_residues
PGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIEIEEGTVRLSEYGRNFLKEKEE
KGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANIAPPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYGT
GKVTMTMIKSEAEARESLQSLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITLD
KCTPLKEPGYATNLEHLQVLSAYI

Specific function: Unknown

COG id: COG4871

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29135; Mature: 29004

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIE
CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
IEEGTVRLSEYGRNFLKEKEEKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANI
ECCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC
APPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYGTGKVTMTMIKSEAEARESLQ
CCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHH
SLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL
HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCEEEE
DKCTPLKEPGYATNLEHLQVLSAYI
CCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIE
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
IEEGTVRLSEYGRNFLKEKEEKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANI
ECCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC
APPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYGTGKVTMTMIKSEAEARESLQ
CCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHH
SLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL
HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCEEEE
DKCTPLKEPGYATNLEHLQVLSAYI
CCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA