The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228139

Identifier: 21228139

GI number: 21228139

Start: 2434953

End: 2435639

Strand: Reverse

Name: 21228139

Synonym: MM_2037

Alternate gene names: NA

Gene position: 2435639-2434953 (Counterclockwise)

Preceding gene: 21228140

Following gene: 21228138

Centisome position: 59.46

GC content: 48.03

Gene sequence:

>687_bases
ATGGAATTAAAAGAAATCAACAATTATGGACAGGAAATAATCAATTGCCTTAAACTTGAAACATCCCCTGTTGCAGTGAA
ACTGATCCCTAAAGGAGAAAAAGTTCCGGAAGGGATCAAAAAAGCTGAGGAAGCCATGAGACACTGCCAGTTCGTTGACC
GTGTAAGGAGGACCGGGGAAGCGTTATACACCGGGTGGGATGATCAGTTATGCAAAGGAGGCGCGGCAGTCATGGGTCTT
GGAGCGCTTCCCCCAAAAGTCGCAAGTGGAGAATTCTACTATAAAGGTTTAAAACAGTTCGGCACCCAGGAAGCCGCAAA
GCGCACTATTGATATGGTGCCAACCCTTGCCCCTCACTCTACAGAAGCTATCCTGTATTCGCCCCTTGAGAAAACCACAT
TTATTCCGGACCTTGTACTGGTGATCTGCAATCCCAGGCAGGTAATGCTGCTCACTCAGGCTTACATGTACAAAGAAGGG
GGAAGGCTTGAAGTCAGTTTCGCGGGCAAACAGAGCCTCTGTTCCGACGGTGTGGTTCAGGCTAAAGAAGGTAAAATGGC
AGTAACAGTAGGCTGTAGCGGCAGCAGACTTTATACAGATATTGCAGACGAAGAAATGACAATAGGTATCCCAATTGACC
TTCTTCCCGACATCGCAGCCGGCCTCAAGGCAATCTGCCCCGAATAA

Upstream 100 bases:

>100_bases
AGCAAAAACAAATAGGTAAAAAAGAGAAGATACATATAAAAAATAATATTAACAAAAATATTAAAAACAATATTAACAAA
ATAGCGGCTAGAGTGATAAA

Downstream 100 bases:

>100_bases
ATATAAAACCCGAATCCTTATTTATGATATAAATTCCTCCATATATATCCCTTAAAGGGGTGAATTACAACCAGATATGA
GATCGCGACATGACCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MELKEINNYGQEIINCLKLETSPVAVKLIPKGEKVPEGIKKAEEAMRHCQFVDRVRRTGEALYTGWDDQLCKGGAAVMGL
GALPPKVASGEFYYKGLKQFGTQEAAKRTIDMVPTLAPHSTEAILYSPLEKTTFIPDLVLVICNPRQVMLLTQAYMYKEG
GRLEVSFAGKQSLCSDGVVQAKEGKMAVTVGCSGSRLYTDIADEEMTIGIPIDLLPDIAAGLKAICPE

Sequences:

>Translated_228_residues
MELKEINNYGQEIINCLKLETSPVAVKLIPKGEKVPEGIKKAEEAMRHCQFVDRVRRTGEALYTGWDDQLCKGGAAVMGL
GALPPKVASGEFYYKGLKQFGTQEAAKRTIDMVPTLAPHSTEAILYSPLEKTTFIPDLVLVICNPRQVMLLTQAYMYKEG
GRLEVSFAGKQSLCSDGVVQAKEGKMAVTVGCSGSRLYTDIADEEMTIGIPIDLLPDIAAGLKAICPE
>Mature_228_residues
MELKEINNYGQEIINCLKLETSPVAVKLIPKGEKVPEGIKKAEEAMRHCQFVDRVRRTGEALYTGWDDQLCKGGAAVMGL
GALPPKVASGEFYYKGLKQFGTQEAAKRTIDMVPTLAPHSTEAILYSPLEKTTFIPDLVLVICNPRQVMLLTQAYMYKEG
GRLEVSFAGKQSLCSDGVVQAKEGKMAVTVGCSGSRLYTDIADEEMTIGIPIDLLPDIAAGLKAICPE

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003748 [H]

Pfam domain/function: PF02596 DUF169 [H]

EC number: NA

Molecular weight: Translated: 24815; Mature: 24815

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKEINNYGQEIINCLKLETSPVAVKLIPKGEKVPEGIKKAEEAMRHCQFVDRVRRTGE
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
ALYTGWDDQLCKGGAAVMGLGALPPKVASGEFYYKGLKQFGTQEAAKRTIDMVPTLAPHS
HEECCCCHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCC
TEAILYSPLEKTTFIPDLVLVICNPRQVMLLTQAYMYKEGGRLEVSFAGKQSLCSDGVVQ
CCEEEECCCHHHHHCCCEEEEEECCCCEEHHHHHHHHCCCCEEEEEECCCHHHCCCCCEE
AKEGKMAVTVGCSGSRLYTDIADEEMTIGIPIDLLPDIAAGLKAICPE
ECCCCEEEEEECCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELKEINNYGQEIINCLKLETSPVAVKLIPKGEKVPEGIKKAEEAMRHCQFVDRVRRTGE
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
ALYTGWDDQLCKGGAAVMGLGALPPKVASGEFYYKGLKQFGTQEAAKRTIDMVPTLAPHS
HEECCCCHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCC
TEAILYSPLEKTTFIPDLVLVICNPRQVMLLTQAYMYKEGGRLEVSFAGKQSLCSDGVVQ
CCEEEECCCHHHHHCCCEEEEEECCCCEEHHHHHHHHCCCCEEEEEECCCHHHCCCCCEE
AKEGKMAVTVGCSGSRLYTDIADEEMTIGIPIDLLPDIAAGLKAICPE
ECCCCEEEEEECCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]