Click here to switch to the map view.

The map label for this gene is 21228138

Identifier: 21228138

GI number: 21228138

Start: 2434009

End: 2434578

Strand: Reverse

Name: 21228138

Synonym: MM_2036

Alternate gene names: NA

Gene position: 2434578-2434009 (Counterclockwise)

Preceding gene: 21228139

Following gene: 21228137

Centisome position: 59.43

GC content: 45.09

Gene sequence:

>570_bases
GTGCTCCCGAAGCGAAACTCGGGAGACAATGAATTATATACTAACAGAGAAAAGAGAAAGAAAATGACCTCTTACATAGC
AGACTCGGCAGTCTTTATAATGGGAAACTGCGGCGTGGACAGTTCGCTGCTTATTACTGTCCCTTCGGTTGCGGACGAAT
TGAAGAGCAGGGATTCCATGCTCCGTTTTGACCTTGCAAAAGAGGAAGGGTTAAGGGTAGAATGGCCAGAACCGGAAATG
GTAAAAGAGGTTCGGAAAAAAGCTGAACAGACGCGGGACTCCGAGGAACTTTCAAAAACAGACCTGGAAATTCTTGCAAA
AGCTCTTGAACACAGGGAGACAGCTGTACTGCTCACGGATGATTACGCGGTCCAGAATGTTGCCGTGCAGCTCGGGATTC
AGGTTAAACCTATAGCCCAGAAAAAGATAAAGGATGTTCTTATCTGGCAAAAGCAGTGTACTGGCTGTAAAAAAACCTTT
GATAAGGGAGATGAATGCCCTATTTGCGGATCACCCCTGAAAAAAAAGAGAAAAAGAAAACTTAAAGGCAAAGGTTACCG
GGAAAGCTGA

Upstream 100 bases:

>100_bases
TTAGACAATAAAATTAATTAGAACCACAGTAAGTTCTGATTGAGTTTAGATCATTATATAACTTTTAAAGTAGTCCTCTT
GAGCGAGCGAAAAGGACCTC

Downstream 100 bases:

>100_bases
AGAAAAAGATATAACGCTTGATAGTCTAATAATGTTTTTAACTGAGAAAAGATATACTTGAATAAAATTTTTCGGGCAGT
AATTCCAGGCAGTATTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLPKRNSGDNELYTNREKRKKMTSYIADSAVFIMGNCGVDSSLLITVPSVADELKSRDSMLRFDLAKEEGLRVEWPEPEM
VKEVRKKAEQTRDSEELSKTDLEILAKALEHRETAVLLTDDYAVQNVAVQLGIQVKPIAQKKIKDVLIWQKQCTGCKKTF
DKGDECPICGSPLKKKRKRKLKGKGYRES

Sequences:

>Translated_189_residues
MLPKRNSGDNELYTNREKRKKMTSYIADSAVFIMGNCGVDSSLLITVPSVADELKSRDSMLRFDLAKEEGLRVEWPEPEM
VKEVRKKAEQTRDSEELSKTDLEILAKALEHRETAVLLTDDYAVQNVAVQLGIQVKPIAQKKIKDVLIWQKQCTGCKKTF
DKGDECPICGSPLKKKRKRKLKGKGYRES
>Mature_189_residues
MLPKRNSGDNELYTNREKRKKMTSYIADSAVFIMGNCGVDSSLLITVPSVADELKSRDSMLRFDLAKEEGLRVEWPEPEM
VKEVRKKAEQTRDSEELSKTDLEILAKALEHRETAVLLTDDYAVQNVAVQLGIQVKPIAQKKIKDVLIWQKQCTGCKKTF
DKGDECPICGSPLKKKRKRKLKGKGYRES

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006596
- InterPro:   IPR022907 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21490; Mature: 21490

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKRNSGDNELYTNREKRKKMTSYIADSAVFIMGNCGVDSSLLITVPSVADELKSRDSM
CCCCCCCCCCCHHCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHH
LRFDLAKEEGLRVEWPEPEMVKEVRKKAEQTRDSEELSKTDLEILAKALEHRETAVLLTD
HHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
DYAVQNVAVQLGIQVKPIAQKKIKDVLIWQKQCTGCKKTFDKGDECPICGSPLKKKRKRK
CHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHH
LKGKGYRES
HCCCCCCCC
>Mature Secondary Structure
MLPKRNSGDNELYTNREKRKKMTSYIADSAVFIMGNCGVDSSLLITVPSVADELKSRDSM
CCCCCCCCCCCHHCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHH
LRFDLAKEEGLRVEWPEPEMVKEVRKKAEQTRDSEELSKTDLEILAKALEHRETAVLLTD
HHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
DYAVQNVAVQLGIQVKPIAQKKIKDVLIWQKQCTGCKKTFDKGDECPICGSPLKKKRKRK
CHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHH
LKGKGYRES
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]