| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228140
Identifier: 21228140
GI number: 21228140
Start: 2435921
End: 2436247
Strand: Reverse
Name: 21228140
Synonym: MM_2038
Alternate gene names: NA
Gene position: 2436247-2435921 (Counterclockwise)
Preceding gene: 21228144
Following gene: 21228139
Centisome position: 59.47
GC content: 42.81
Gene sequence:
>327_bases ATGGTCACTGAAATTTCACTCAATACCATATGCGGACATACAACAAAAATAATCGCTACAAAAGAAGGAAAAAACACCCA TATACATATTAAAACCACCTGTGAAAAACTTAGAAAATGGGGCACAAAATTCGATATGGGCACAAAAGACCTCATGGGAG GGCCCGATACAGTTCTCGCCCGGAAATCAGCTGAAAATCCTCTTACTCCCACATGCCTTGTCCCGGCTGCCGTGATGAAC GCCTGCTGGCTCGAAAACGGCATGATCTCTAAAAACCTTGCCAGGGGAATGGGAAAAATGGAAATTATTTTTGACAAACT TGAGTGA
Upstream 100 bases:
>100_bases AGGAAAAGAGATTCAGGTACAGGAAAGGAAGAAACTCTCAGATTCTGCATTAAAAAGCTTTTTAGTCTCCGGATAACTAT TCAATAAACGAGGATAAATA
Downstream 100 bases:
>100_bases AGATAACTCAATGAATGAATTCCAGTTTTTACTCCTTTTAAGATAATGAGCAGTACGGGACCGAAAAAAGGAATTATGGA AACTGGATAAAAAATTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVTEISLNTICGHTTKIIATKEGKNTHIHIKTTCEKLRKWGTKFDMGTKDLMGGPDTVLARKSAENPLTPTCLVPAAVMN ACWLENGMISKNLARGMGKMEIIFDKLE
Sequences:
>Translated_108_residues MVTEISLNTICGHTTKIIATKEGKNTHIHIKTTCEKLRKWGTKFDMGTKDLMGGPDTVLARKSAENPLTPTCLVPAAVMN ACWLENGMISKNLARGMGKMEIIFDKLE >Mature_108_residues MVTEISLNTICGHTTKIIATKEGKNTHIHIKTTCEKLRKWGTKFDMGTKDLMGGPDTVLARKSAENPLTPTCLVPAAVMN ACWLENGMISKNLARGMGKMEIIFDKLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11891; Mature: 11891
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTEISLNTICGHTTKIIATKEGKNTHIHIKTTCEKLRKWGTKFDMGTKDLMGGPDTVLA CCEEECCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHCCCCCCEEE RKSAENPLTPTCLVPAAVMNACWLENGMISKNLARGMGKMEIIFDKLE ECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MVTEISLNTICGHTTKIIATKEGKNTHIHIKTTCEKLRKWGTKFDMGTKDLMGGPDTVLA CCEEECCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHCCCCCCEEE RKSAENPLTPTCLVPAAVMNACWLENGMISKNLARGMGKMEIIFDKLE ECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA