Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228078

Identifier: 21228078

GI number: 21228078

Start: 2347826

End: 2349835

Strand: Direct

Name: 21228078

Synonym: MM_1976

Alternate gene names: NA

Gene position: 2347826-2349835 (Clockwise)

Preceding gene: 21228071

Following gene: 21228079

Centisome position: 57.32

GC content: 50.15

Gene sequence:

>2010_bases
ATGAAGAGATTTGCAGCAGTATCACTGGCTGCTCTCATGCTTCTCACTGTATTTGCATCCGCCGCAAGTGCAGCAGACGT
AATTGAGATCCGCGGTCCAGTATACAACGGCTCTGATATCAACGACATTATTGACACATATGGTGAAAATAATGCCCTTA
CAATCGATGCTACAAAGTTTGCAGCATTCTACTATGACATTGATGACAATGTAACAACCGAAACCCTTTCCATTCTTGCG
GTTCCAGGCACTGAAGGAAACGTCATTGGAGAAGGCGGAATTGTCTATGAGACAACAATCCAGCAGGTTGACTACGAATT
CTACAGGCCAGCTGCCGGATGGAGCAACTACAGCTTGATTGGTTTCTTCGCAGAGAAGTACATCCCGATCAACCCTGACA
AAGCTGACAAGCTTGCCAAGCTCGTCCTTGACAGCGATGACAAGTACACCATCAGAACCGGCGAACAGCTCGACCTCGGA
GAAGGCTATTCAATCGAAGCCAAGCAGGTCGATGTTGACGGTGAGAAAGTCTGGCTCGAGTTCACCAAGGACGGAGAATT
CGTAGATGACGAAATCATCTCAGTCGTTAGCGGCTCTGACAACACCTGGGAAGTTGAACTTGATGACATCCAGGACGAAG
ACGATGTCGTTGTCCTCAGAGTACACGTCAACCAGGTCTTCCAGGGTGCAGTCGACAGCATTGCCCAGATCGAAGGTCTC
TGGCTCATTGACTACACAAATGCAATGAAGATCGAGTCTGACGATGAATTCGGAAACCTTGACAATGTCAAGATCAACGG
TGACACCCTTACCATCACCAACGAAGACACCTTCACCCTGACCAGGGACGATGAAGAGGAAATCGCTGAGGGTCTGTTCT
TCAAGACCGCCGATGACACCAGAGCACTCAGGTTCTACGCCATGAAGCAGATCACAGAGCCTGGCACCTATGAAATCAGA
GGAGAGGTCGCTGAGGGTGACTTCAGCTGGGATGCAACCAACTTTGCAGGATTCTTCTATGATGTCAACGACGATGTCTC
TACAGAATCCCTTACAGTAACCGGCCTTAACGGTGGAAATGTAATTCCTGAGGGCGGCCTCGTTTACGAGACAACCATCC
AGATGGTTGACTACGAGTACTCCAAGCCTTCCGTTGGCTGGGACCAGTTCCCTGTTCTCGGATTCTTCGCAGAAGAATAC
ATCCCGATCAACGCTGACAAAGCTGACAAACTTGCCAAGCTCGTCCTTGACAGCGATGACAAGTACACCATCAGAACCGG
CGAACAGCTCGACCTCGGAGAAGGCTATGCAATCGAAGCCAAGCAGGTCGATGTTGACGGTGAGAAAGTCTGGCTCGAGT
TCACCAAGGACGGAGAATTCGTAGATGACGAAATCATCTCAGTCGTTAGCGGCTCTGACAACACCTGGGAAGTTGAACTT
GATGACATCCAGGACGAAGACGATGTCGTTGTCCTCAGAGTACACGTCAACCAGGTCTTCCAGGGTGCAGTCGACAGCAT
TGCCCAGATCGAAGGTATCTGGCTCATTGACTACGCAAACGCAATGAAGATCGAGTCTGATGATGAATTCGGTGACCTCG
ACAATGTCAAGATCAACGGTGCCACCCTTACCATCACCAACGAAGACACCTTCACTCTGACCAGAGATGACGAAGTCGAA
ATCGGCCAGGGAATGTTCTTCAAGGTTGCTGACACCGCAGCTTCTGACCTCAGATACTACCCATTCGTCGAGAAGACCAT
CGACGGAGAAGTAGTTGATGATGATGAAGATGATGACAATGTGACTGAGCCTGTAGACAACGACACCGAAGTTGAGGAAC
CAACCGAGGAACCAACCGAGGGACCAACCGAGGAACCAACCGAGGGACCAACAACTGAGGAACCAACCGAGGAACCCACT
GAAGCAGATGGCACCACTCCTGGATTCGGAGTTGTCCTTGGCCTTGTCGGACTCCTTGCAGTCGTCTACCTCGTCAGGAG
GAACAACTAA

Upstream 100 bases:

>100_bases
AGTCTGATTTGGTGAAGAATGGTGAAACCCTTTAAGTGTTCGATCCCGACACTTCTTCTTACATACGATATATCTTAACA
AACATGGAGGAAACAATAAA

Downstream 100 bases:

>100_bases
ATTCTCTGAGTGAAGGGTTCTACCCTTCTCTCTTTTAAATTCTTTTTTGGTTTCTTCTTGCAGATAACTTTTTATTTGCA
GATTTCTTAGTTCTGATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKFAAFYYDIDDNVTTETLSILA
VPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLIGFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLG
EGYSIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL
WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDTRALRFYAMKQITEPGTYEIR
GEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGNVIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEY
IPINADKADKLAKLVLDSDDKYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL
DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKINGATLTITNEDTFTLTRDDEVE
IGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDNVTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPT
EADGTTPGFGVVLGLVGLLAVVYLVRRNN

Sequences:

>Translated_669_residues
MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKFAAFYYDIDDNVTTETLSILA
VPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLIGFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLG
EGYSIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL
WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDTRALRFYAMKQITEPGTYEIR
GEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGNVIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEY
IPINADKADKLAKLVLDSDDKYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL
DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKINGATLTITNEDTFTLTRDDEVE
IGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDNVTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPT
EADGTTPGFGVVLGLVGLLAVVYLVRRNN
>Mature_669_residues
MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKFAAFYYDIDDNVTTETLSILA
VPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLIGFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLG
EGYSIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL
WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDTRALRFYAMKQITEPGTYEIR
GEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGNVIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEY
IPINADKADKLAKLVLDSDDKYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL
DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKINGATLTITNEDTFTLTRDDEVE
IGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDNVTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPT
EADGTTPGFGVVLGLVGLLAVVYLVRRNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74054; Mature: 74054

Theoretical pI: Translated: 3.59; Mature: 3.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKF
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEE
AAFYYDIDDNVTTETLSILAVPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLI
EEEEEECCCCCCEEEEEEEEECCCCCCEEECCCEEEEEHHHHHCHHHCCCCCCCCCCEEE
GFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLGEGYSIEAKQVDVDGEKVWLE
EEEECCEECCCCCHHHHHHHHHCCCCCCEEEECCCEEECCCCCEEEEEEEECCCCEEEEE
FTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL
EECCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCE
WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDT
EEEEECCEEEECCCCCCCCCCEEEECCCEEEEECCCEEEEECCCHHHHHCCCEEEECCCC
RALRFYAMKQITEPGTYEIRGEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGN
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC
VIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEYIPINADKADKLAKLVLDSDD
CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEHHHEEECCCCCHHHHHHHEECCCC
KYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL
CEEEECCCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHEECCCCCEEEEEE
DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKING
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCCEEECC
ATLTITNEDTFTLTRDDEVEIGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDN
EEEEEECCCEEEEECCCCCCCCCCEEEEEECCCHHCCEECCCHHHCCCCCEECCCCCCCC
VTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPTEADGTTPGFGVVLGLVGLLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VVYLVRRNN
HHHHHHCCC
>Mature Secondary Structure
MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKF
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEE
AAFYYDIDDNVTTETLSILAVPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLI
EEEEEECCCCCCEEEEEEEEECCCCCCEEECCCEEEEEHHHHHCHHHCCCCCCCCCCEEE
GFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLGEGYSIEAKQVDVDGEKVWLE
EEEECCEECCCCCHHHHHHHHHCCCCCCEEEECCCEEECCCCCEEEEEEEECCCCEEEEE
FTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL
EECCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCE
WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDT
EEEEECCEEEECCCCCCCCCCEEEECCCEEEEECCCEEEEECCCHHHHHCCCEEEECCCC
RALRFYAMKQITEPGTYEIRGEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGN
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC
VIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEYIPINADKADKLAKLVLDSDD
CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEHHHEEECCCCCHHHHHHHEECCCC
KYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL
CEEEECCCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHEECCCCCEEEEEE
DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKING
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCCEEECC
ATLTITNEDTFTLTRDDEVEIGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDN
EEEEEECCCEEEEECCCCCCCCCCEEEEEECCCHHCCEECCCHHHCCCCCEECCCCCCCC
VTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPTEADGTTPGFGVVLGLVGLLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VVYLVRRNN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA