| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228078
Identifier: 21228078
GI number: 21228078
Start: 2347826
End: 2349835
Strand: Direct
Name: 21228078
Synonym: MM_1976
Alternate gene names: NA
Gene position: 2347826-2349835 (Clockwise)
Preceding gene: 21228071
Following gene: 21228079
Centisome position: 57.32
GC content: 50.15
Gene sequence:
>2010_bases ATGAAGAGATTTGCAGCAGTATCACTGGCTGCTCTCATGCTTCTCACTGTATTTGCATCCGCCGCAAGTGCAGCAGACGT AATTGAGATCCGCGGTCCAGTATACAACGGCTCTGATATCAACGACATTATTGACACATATGGTGAAAATAATGCCCTTA CAATCGATGCTACAAAGTTTGCAGCATTCTACTATGACATTGATGACAATGTAACAACCGAAACCCTTTCCATTCTTGCG GTTCCAGGCACTGAAGGAAACGTCATTGGAGAAGGCGGAATTGTCTATGAGACAACAATCCAGCAGGTTGACTACGAATT CTACAGGCCAGCTGCCGGATGGAGCAACTACAGCTTGATTGGTTTCTTCGCAGAGAAGTACATCCCGATCAACCCTGACA AAGCTGACAAGCTTGCCAAGCTCGTCCTTGACAGCGATGACAAGTACACCATCAGAACCGGCGAACAGCTCGACCTCGGA GAAGGCTATTCAATCGAAGCCAAGCAGGTCGATGTTGACGGTGAGAAAGTCTGGCTCGAGTTCACCAAGGACGGAGAATT CGTAGATGACGAAATCATCTCAGTCGTTAGCGGCTCTGACAACACCTGGGAAGTTGAACTTGATGACATCCAGGACGAAG ACGATGTCGTTGTCCTCAGAGTACACGTCAACCAGGTCTTCCAGGGTGCAGTCGACAGCATTGCCCAGATCGAAGGTCTC TGGCTCATTGACTACACAAATGCAATGAAGATCGAGTCTGACGATGAATTCGGAAACCTTGACAATGTCAAGATCAACGG TGACACCCTTACCATCACCAACGAAGACACCTTCACCCTGACCAGGGACGATGAAGAGGAAATCGCTGAGGGTCTGTTCT TCAAGACCGCCGATGACACCAGAGCACTCAGGTTCTACGCCATGAAGCAGATCACAGAGCCTGGCACCTATGAAATCAGA GGAGAGGTCGCTGAGGGTGACTTCAGCTGGGATGCAACCAACTTTGCAGGATTCTTCTATGATGTCAACGACGATGTCTC TACAGAATCCCTTACAGTAACCGGCCTTAACGGTGGAAATGTAATTCCTGAGGGCGGCCTCGTTTACGAGACAACCATCC AGATGGTTGACTACGAGTACTCCAAGCCTTCCGTTGGCTGGGACCAGTTCCCTGTTCTCGGATTCTTCGCAGAAGAATAC ATCCCGATCAACGCTGACAAAGCTGACAAACTTGCCAAGCTCGTCCTTGACAGCGATGACAAGTACACCATCAGAACCGG CGAACAGCTCGACCTCGGAGAAGGCTATGCAATCGAAGCCAAGCAGGTCGATGTTGACGGTGAGAAAGTCTGGCTCGAGT TCACCAAGGACGGAGAATTCGTAGATGACGAAATCATCTCAGTCGTTAGCGGCTCTGACAACACCTGGGAAGTTGAACTT GATGACATCCAGGACGAAGACGATGTCGTTGTCCTCAGAGTACACGTCAACCAGGTCTTCCAGGGTGCAGTCGACAGCAT TGCCCAGATCGAAGGTATCTGGCTCATTGACTACGCAAACGCAATGAAGATCGAGTCTGATGATGAATTCGGTGACCTCG ACAATGTCAAGATCAACGGTGCCACCCTTACCATCACCAACGAAGACACCTTCACTCTGACCAGAGATGACGAAGTCGAA ATCGGCCAGGGAATGTTCTTCAAGGTTGCTGACACCGCAGCTTCTGACCTCAGATACTACCCATTCGTCGAGAAGACCAT CGACGGAGAAGTAGTTGATGATGATGAAGATGATGACAATGTGACTGAGCCTGTAGACAACGACACCGAAGTTGAGGAAC CAACCGAGGAACCAACCGAGGGACCAACCGAGGAACCAACCGAGGGACCAACAACTGAGGAACCAACCGAGGAACCCACT GAAGCAGATGGCACCACTCCTGGATTCGGAGTTGTCCTTGGCCTTGTCGGACTCCTTGCAGTCGTCTACCTCGTCAGGAG GAACAACTAA
Upstream 100 bases:
>100_bases AGTCTGATTTGGTGAAGAATGGTGAAACCCTTTAAGTGTTCGATCCCGACACTTCTTCTTACATACGATATATCTTAACA AACATGGAGGAAACAATAAA
Downstream 100 bases:
>100_bases ATTCTCTGAGTGAAGGGTTCTACCCTTCTCTCTTTTAAATTCTTTTTTGGTTTCTTCTTGCAGATAACTTTTTATTTGCA GATTTCTTAGTTCTGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKFAAFYYDIDDNVTTETLSILA VPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLIGFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLG EGYSIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDTRALRFYAMKQITEPGTYEIR GEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGNVIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEY IPINADKADKLAKLVLDSDDKYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKINGATLTITNEDTFTLTRDDEVE IGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDNVTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPT EADGTTPGFGVVLGLVGLLAVVYLVRRNN
Sequences:
>Translated_669_residues MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKFAAFYYDIDDNVTTETLSILA VPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLIGFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLG EGYSIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDTRALRFYAMKQITEPGTYEIR GEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGNVIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEY IPINADKADKLAKLVLDSDDKYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKINGATLTITNEDTFTLTRDDEVE IGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDNVTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPT EADGTTPGFGVVLGLVGLLAVVYLVRRNN >Mature_669_residues MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKFAAFYYDIDDNVTTETLSILA VPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLIGFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLG EGYSIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDTRALRFYAMKQITEPGTYEIR GEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGNVIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEY IPINADKADKLAKLVLDSDDKYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKINGATLTITNEDTFTLTRDDEVE IGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDNVTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPT EADGTTPGFGVVLGLVGLLAVVYLVRRNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74054; Mature: 74054
Theoretical pI: Translated: 3.59; Mature: 3.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKF CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEE AAFYYDIDDNVTTETLSILAVPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLI EEEEEECCCCCCEEEEEEEEECCCCCCEEECCCEEEEEHHHHHCHHHCCCCCCCCCCEEE GFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLGEGYSIEAKQVDVDGEKVWLE EEEECCEECCCCCHHHHHHHHHCCCCCCEEEECCCEEECCCCCEEEEEEEECCCCEEEEE FTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL EECCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCE WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDT EEEEECCEEEECCCCCCCCCCEEEECCCEEEEECCCEEEEECCCHHHHHCCCEEEECCCC RALRFYAMKQITEPGTYEIRGEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGN HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC VIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEYIPINADKADKLAKLVLDSDD CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEHHHEEECCCCCHHHHHHHEECCCC KYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL CEEEECCCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHEECCCCCEEEEEE DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKING CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCCEEECC ATLTITNEDTFTLTRDDEVEIGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDN EEEEEECCCEEEEECCCCCCCCCCEEEEEECCCHHCCEECCCHHHCCCCCEECCCCCCCC VTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPTEADGTTPGFGVVLGLVGLLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VVYLVRRNN HHHHHHCCC >Mature Secondary Structure MKRFAAVSLAALMLLTVFASAASAADVIEIRGPVYNGSDINDIIDTYGENNALTIDATKF CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEE AAFYYDIDDNVTTETLSILAVPGTEGNVIGEGGIVYETTIQQVDYEFYRPAAGWSNYSLI EEEEEECCCCCCEEEEEEEEECCCCCCEEECCCEEEEEHHHHHCHHHCCCCCCCCCCEEE GFFAEKYIPINPDKADKLAKLVLDSDDKYTIRTGEQLDLGEGYSIEAKQVDVDGEKVWLE EEEECCEECCCCCHHHHHHHHHCCCCCCEEEECCCEEECCCCCEEEEEEEECCCCEEEEE FTKDGEFVDDEIISVVSGSDNTWEVELDDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGL EECCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCE WLIDYTNAMKIESDDEFGNLDNVKINGDTLTITNEDTFTLTRDDEEEIAEGLFFKTADDT EEEEECCEEEECCCCCCCCCCEEEECCCEEEEECCCEEEEECCCHHHHHCCCEEEECCCC RALRFYAMKQITEPGTYEIRGEVAEGDFSWDATNFAGFFYDVNDDVSTESLTVTGLNGGN HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC VIPEGGLVYETTIQMVDYEYSKPSVGWDQFPVLGFFAEEYIPINADKADKLAKLVLDSDD CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEHHHEEECCCCCHHHHHHHEECCCC KYTIRTGEQLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEFVDDEIISVVSGSDNTWEVEL CEEEECCCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHEECCCCCEEEEEE DDIQDEDDVVVLRVHVNQVFQGAVDSIAQIEGIWLIDYANAMKIESDDEFGDLDNVKING CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCCEEECC ATLTITNEDTFTLTRDDEVEIGQGMFFKVADTAASDLRYYPFVEKTIDGEVVDDDEDDDN EEEEEECCCEEEEECCCCCCCCCCEEEEEECCCHHCCEECCCHHHCCCCCEECCCCCCCC VTEPVDNDTEVEEPTEEPTEGPTEEPTEGPTTEEPTEEPTEADGTTPGFGVVLGLVGLLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VVYLVRRNN HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA