Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228079

Identifier: 21228079

GI number: 21228079

Start: 2350005

End: 2350583

Strand: Direct

Name: 21228079

Synonym: MM_1977

Alternate gene names: NA

Gene position: 2350005-2350583 (Clockwise)

Preceding gene: 21228078

Following gene: 21228084

Centisome position: 57.37

GC content: 44.21

Gene sequence:

>579_bases
ATGAAAAAAAGCATAGCTTTAATATCAGTGTTTGCGGTTTTGATGATCGCGTTTTCAGGCTGCGTGGATAATTCTCCTGC
AGTTAACGGGACAGATTCGGACAACCCGGAAACAAACCCAATTTCTGATGATGATGCGGCTGGGGTAAGCACAATTGAAA
ACCCCCCAGCAGGCTTTGAGTATATCGATACCATCCCGCTTTCCACAGATGAGATAAAAGTTACTTACGAAGCTGAAAAC
GTTACGGGTATCCTTTCAGGCTCTGAAGGAATCTACAGGGATTCCAATAATACAGACTATTATGTAGATGCGATCGAGCT
TGAGAATGAAGAGGCTGCAAACAATCTCATCGATGCATACAGGTCTTCCTTCCCACCATTAAGTGACGGATCCCGTTTTA
CGGAAGTTTCTTTCAACGGGCATTCCGGAGTTAAAATTACTGACTACATCACATCCGGAGGAAAGTCCGTTCCCAGATAC
TCCTATATCTGGAGCAACGAAAATTATGTGATAGTGGTTTTCGGAAATACTGCTGAAGAGGCTCCTGTAAGGCAGCTGGC
AGAAGCAACAGGATACTGA

Upstream 100 bases:

>100_bases
TTTTATTTGCAGATTTCTTAGTTCTGATGTTCTTTTAAATCTAAAATCCTGATTCTGTAAACCGTCTGGTTATTCAGGGT
TTAAGATCAAGGTGAATTTT

Downstream 100 bases:

>100_bases
TTATCCAGTAGATCTGTACTTTTTCCTTTTTCTCTTTTTTCTTTTTTTCTTTTTTTCTTTTATCTCTTTGAAATTACAAA
CTGCACATGCAAAGAGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKKSIALISVFAVLMIAFSGCVDNSPAVNGTDSDNPETNPISDDDAAGVSTIENPPAGFEYIDTIPLSTDEIKVTYEAEN
VTGILSGSEGIYRDSNNTDYYVDAIELENEEAANNLIDAYRSSFPPLSDGSRFTEVSFNGHSGVKITDYITSGGKSVPRY
SYIWSNENYVIVVFGNTAEEAPVRQLAEATGY

Sequences:

>Translated_192_residues
MKKSIALISVFAVLMIAFSGCVDNSPAVNGTDSDNPETNPISDDDAAGVSTIENPPAGFEYIDTIPLSTDEIKVTYEAEN
VTGILSGSEGIYRDSNNTDYYVDAIELENEEAANNLIDAYRSSFPPLSDGSRFTEVSFNGHSGVKITDYITSGGKSVPRY
SYIWSNENYVIVVFGNTAEEAPVRQLAEATGY
>Mature_192_residues
MKKSIALISVFAVLMIAFSGCVDNSPAVNGTDSDNPETNPISDDDAAGVSTIENPPAGFEYIDTIPLSTDEIKVTYEAEN
VTGILSGSEGIYRDSNNTDYYVDAIELENEEAANNLIDAYRSSFPPLSDGSRFTEVSFNGHSGVKITDYITSGGKSVPRY
SYIWSNENYVIVVFGNTAEEAPVRQLAEATGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20724; Mature: 20724

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIALISVFAVLMIAFSGCVDNSPAVNGTDSDNPETNPISDDDAAGVSTIENPPAGFE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YIDTIPLSTDEIKVTYEAENVTGILSGSEGIYRDSNNTDYYVDAIELENEEAANNLIDAY
EEEECCCCCCCEEEEEECCCEEEEEECCCCEEECCCCCCEEEEEEEECCHHHHHHHHHHH
RSSFPPLSDGSRFTEVSFNGHSGVKITDYITSGGKSVPRYSYIWSNENYVIVVFGNTAEE
HHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCH
APVRQLAEATGY
HHHHHHHHHCCC
>Mature Secondary Structure
MKKSIALISVFAVLMIAFSGCVDNSPAVNGTDSDNPETNPISDDDAAGVSTIENPPAGFE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YIDTIPLSTDEIKVTYEAENVTGILSGSEGIYRDSNNTDYYVDAIELENEEAANNLIDAY
EEEECCCCCCCEEEEEECCCEEEEEECCCCEEECCCCCCEEEEEEEECCHHHHHHHHHHH
RSSFPPLSDGSRFTEVSFNGHSGVKITDYITSGGKSVPRYSYIWSNENYVIVVFGNTAEE
HHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCH
APVRQLAEATGY
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA