Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228040

Identifier: 21228040

GI number: 21228040

Start: 2306509

End: 2306892

Strand: Direct

Name: 21228040

Synonym: MM_1938

Alternate gene names: NA

Gene position: 2306509-2306892 (Clockwise)

Preceding gene: 21228036

Following gene: 21228041

Centisome position: 56.31

GC content: 43.75

Gene sequence:

>384_bases
ATGCTCCTTGTAATTGCTACTGTCGTCTTTGCAGCCGGTTGTGCTGAACAGACAGAAGAAGGAGCTACTGAAGAAGTTGT
TGAAGAAACCCCCGTAGCTGAAGCACCTGCTGAAGACGAAATGGCTGAAGAAGTAGTTGAAGAAGAAGTACCTGCTGAAG
AAGAAGTACCTGCTGAAGAAGAAGTAGCTGAAGAAGCTACCGAAGAAGAAGTACCTGCTGAAGAAGAAGTAGCTGAAGAA
GCTACCGAAGAAGAAGTACCTGCTGAAGAAGAAGTAGCTGAAGAAGAAGTAGCTGAAGAAGAAGTAGCCGAAGAAGAAGT
AGCCGAAGAAGAAGTAGTTGAAGAAGAAGCTACTGAAGAAGAAGCTACTGAAGAAGCTAAATAA

Upstream 100 bases:

>100_bases
TCTCATATGAATGTCTCATGAATTTGTATGAGATGGGTGTAAAAAAGGAAGAGAACTTTTAGAGGTAAAATTAATGAAAA
AAATGTTAAAGATCATGGCA

Downstream 100 bases:

>100_bases
GAGTGAAACTTCTTAAGCGGTTTATTCTAAGTCACAATGCGCGTAGCCTTTTCAGGCTACATCTTTCTATTTTTGAAATT
TATTCCCAATTTACAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEEEVAEEATEEEVPAEEEVAEE
ATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEEEATEEAK

Sequences:

>Translated_127_residues
MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEEEVAEEATEEEVPAEEEVAEE
ATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEEEATEEAK
>Mature_127_residues
MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEEEVAEEATEEEVPAEEEVAEE
ATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEEEATEEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13795; Mature: 13795

Theoretical pI: Translated: 2.63; Mature: 2.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEE
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
EVAEEATEEEVPAEEEVAEEATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEE
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATEEAK
HHHHCCC
>Mature Secondary Structure
MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEE
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
EVAEEATEEEVPAEEEVAEEATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEE
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATEEAK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA