| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is glnH [H]
Identifier: 21228041
GI number: 21228041
Start: 2307683
End: 2308537
Strand: Direct
Name: glnH [H]
Synonym: MM_1939
Alternate gene names: 21228041
Gene position: 2307683-2308537 (Clockwise)
Preceding gene: 21228040
Following gene: 21228042
Centisome position: 56.34
GC content: 49.36
Gene sequence:
>855_bases ATGAAAAAAATGTTAAAGATCATGGCAATGCTTTTTGTGATTGCTACTGTTGTCTTTGCAGCCGGCTGTGCTGAACAGGG AGGAGAGGAAACAGTAGAGGAAGCTGCTGAAGAAAGCGCTCCCGTTGAAGAGACAGCCAGCGCTGAAGTGAATGCTTCCG GCGAAGAAATGCCCACCTATATCGTAGGTACTGAAGCCCAGTTCCCCCCCTTTGAGATTGTAGACTCCCGCGGGAAAGTG GTCGGCTTTGACGTTGACCTCCTGAACGCAATTGCTGAAGATCAGGGCTTTAAAGTCCAGTATCTTGACCAGGACTTTGC AGGCCTCATCCCCGCCCTTCAGACAGGAAACATTGACATCATTGCTTCAGGCATGACAATTACCGAGGAACGCGAACAGG AAGTCGATTTCAGCGAGCCTTATATTACCGCAGGCCTGGCTCTTGCCGTACCCATTAACAATGAAGAGATCCAGAGTGTT GCTGATCTTCAGGGCAAGACCGTAGCTGTCCAGACTGGATCCACCGGTTTCATGAAAGCAGAAGAACTCAAAGAAGCCGG AGTCATTGCTGAGATCAAAGACTTCCCTCACGTCAATGAAGCCATCGAAGAACTCAAGATTGGCGGCGCGGATGTAATGA TCAATGATCTTCCAGTGACAGAAGCCTTTATTGCAGCCCAGCCAGACGTGATTAAGATTGTGGGAGAGCCTCTCAACAGC GAGTCCTATGGGTTTGCTGTCCGCACAGGCAACACAGAGCTCCTTCAGAAGATCAACACCGGCCTTGAAAACGTCAAAGC AAGCGGCGAGTATGACGAACTTCTGACAAACCTGCCCAAATATATGGAAGAATAA
Upstream 100 bases:
>100_bases TTTTAAACTCTAAAGCTATTAATCTGTTGTTTTACTATTTATAAAAGTTTAATTATCTTACATAATTAATATTAAGGAAG AGTTTTCAGAGGTAAAATTA
Downstream 100 bases:
>100_bases ACTTAACCAGATTTACTTCGAGAGCTGCATAATTTTTCTGCTCTCAATTTCTTTTCTTATTAATTTTGTTTTTTCATTCT CTCTTTTTTGATATCATCGG
Product: glutamine-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKKMLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTYIVGTEAQFPPFEIVDSRGKV VGFDVDLLNAIAEDQGFKVQYLDQDFAGLIPALQTGNIDIIASGMTITEEREQEVDFSEPYITAGLALAVPINNEEIQSV ADLQGKTVAVQTGSTGFMKAEELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAAQPDVIKIVGEPLNS ESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE
Sequences:
>Translated_284_residues MKKMLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTYIVGTEAQFPPFEIVDSRGKV VGFDVDLLNAIAEDQGFKVQYLDQDFAGLIPALQTGNIDIIASGMTITEEREQEVDFSEPYITAGLALAVPINNEEIQSV ADLQGKTVAVQTGSTGFMKAEELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAAQPDVIKIVGEPLNS ESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE >Mature_284_residues MKKMLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTYIVGTEAQFPPFEIVDSRGKV VGFDVDLLNAIAEDQGFKVQYLDQDFAGLIPALQTGNIDIIASGMTITEEREQEVDFSEPYITAGLALAVPINNEEIQSV ADLQGKTVAVQTGSTGFMKAEELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAAQPDVIKIVGEPLNS ESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=217, Percent_Identity=39.63133640553, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1787088, Length=220, Percent_Identity=35.9090909090909, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1788228, Length=216, Percent_Identity=26.8518518518519, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787085, Length=234, Percent_Identity=28.6324786324786, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1788649, Length=226, Percent_Identity=30.0884955752212, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788648, Length=222, Percent_Identity=28.8288288288288, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786876, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30532; Mature: 30532
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTY CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEE IVGTEAQFPPFEIVDSRGKVVGFDVDLLNAIAEDQGFKVQYLDQDFAGLIPALQTGNIDI EEECCCCCCCHHEECCCCCEEEECHHHHHHHHCCCCCEEEECCCHHHHHHCHHCCCCEEE IASGMTITEEREQEVDFSEPYITAGLALAVPINNEEIQSVADLQGKTVAVQTGSTGFMKA EECCCEECCHHHHCCCCCCCEEECCEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCHHH EELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAAQPDVIKIVGEPLNS HHHHHCCCCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCC ESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE CCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKMLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTY CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEE IVGTEAQFPPFEIVDSRGKVVGFDVDLLNAIAEDQGFKVQYLDQDFAGLIPALQTGNIDI EEECCCCCCCHHEECCCCCEEEECHHHHHHHHCCCCCEEEECCCHHHHHHCHHCCCCEEE IASGMTITEEREQEVDFSEPYITAGLALAVPINNEEIQSVADLQGKTVAVQTGSTGFMKA EECCCEECCHHHHCCCCCCCEEECCEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCHHH EELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAAQPDVIKIVGEPLNS HHHHHCCCCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCC ESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE CCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]