| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228036
Identifier: 21228036
GI number: 21228036
Start: 2302331
End: 2303050
Strand: Direct
Name: 21228036
Synonym: MM_1934
Alternate gene names: NA
Gene position: 2302331-2303050 (Clockwise)
Preceding gene: 21228034
Following gene: 21228040
Centisome position: 56.2
GC content: 43.75
Gene sequence:
>720_bases TTGACTTCTTTCACAGAACACGGGCATAAAGCGATAAGGGACAGAATACCGGATATCCTCAGGGATTCTGGCAGGGATTT TGCCGTAAAAGAAATTTCAGATCCTGAATTCCTTCTGGAGCTGGAGAGAAAACTTGAAGAAGAACTGGCTGAGTATCTTG AGAGCAAAGAGGCTGAAGAGCTTGCTGACCTTCTTGAAGTAATTTACAGAATTGCAGAACTCAGAGGCTTTTCTAAAGAA GCCCTTGAATCGGTAAGATTGAAAAAGAGAAAGGAAAGTGGGGGGTTTGAAAAGAATCTGATTTTGCTTAACATGGCTGA TGAAAACCGTCTCTGTCGTGGTCCTCCTGCAGCTTCAAAAGAATTCCCCCGTGTGGTTTTCAGGCCTGAAAATTCAGAGG TAATCGAGAAATACGGGGTCCGTATGAGGATTTACACAACCAGAGCAGACTCCCCGAATGCTGCTGTCCTTTATCAGGAA ACAGAGTCCGGGCATGCGGAAGAATTCGTTCACGAAAAAAGTGATTTCCTTTATTATATCCTTGAAGGGTCAGGCACATG GATAGTTGAGGACAGAGAATTTGAAGTAAGATCAGGAGACGTAGTAGTTGTGCCTGCGGGAAAAAGATTCTGGTTTCGCG GAAACCTTAAGCAGATCTGCATAACAGCTCCTGCATGGGATGAAAGATATGAGAGGCACATAAGGGATATTGAACTATAA
Upstream 100 bases:
>100_bases GATATTTTTCTGTTTAAAGAAATGATTTATTTGCTGTAACCTGTTTTAATCTGTTGTAATCTTTTGTATTATCTGGCAGG CCACAGGCGGGAGGCAATTC
Downstream 100 bases:
>100_bases TCATTAAATTTTGTTTTTCTCTCTCACTTATTTTTCTCTCATTTATTATATTCTGTCTGATTATGCTCTGTTTGTTTTCC CTTCTAACCAATCTTCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTSFTEHGHKAIRDRIPDILRDSGRDFAVKEISDPEFLLELERKLEEELAEYLESKEAEELADLLEVIYRIAELRGFSKE ALESVRLKKRKESGGFEKNLILLNMADENRLCRGPPAASKEFPRVVFRPENSEVIEKYGVRMRIYTTRADSPNAAVLYQE TESGHAEEFVHEKSDFLYYILEGSGTWIVEDREFEVRSGDVVVVPAGKRFWFRGNLKQICITAPAWDERYERHIRDIEL
Sequences:
>Translated_239_residues MTSFTEHGHKAIRDRIPDILRDSGRDFAVKEISDPEFLLELERKLEEELAEYLESKEAEELADLLEVIYRIAELRGFSKE ALESVRLKKRKESGGFEKNLILLNMADENRLCRGPPAASKEFPRVVFRPENSEVIEKYGVRMRIYTTRADSPNAAVLYQE TESGHAEEFVHEKSDFLYYILEGSGTWIVEDREFEVRSGDVVVVPAGKRFWFRGNLKQICITAPAWDERYERHIRDIEL >Mature_238_residues TSFTEHGHKAIRDRIPDILRDSGRDFAVKEISDPEFLLELERKLEEELAEYLESKEAEELADLLEVIYRIAELRGFSKEA LESVRLKKRKESGGFEKNLILLNMADENRLCRGPPAASKEFPRVVFRPENSEVIEKYGVRMRIYTTRADSPNAAVLYQET ESGHAEEFVHEKSDFLYYILEGSGTWIVEDREFEVRSGDVVVVPAGKRFWFRGNLKQICITAPAWDERYERHIRDIEL
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27831; Mature: 27700
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFTEHGHKAIRDRIPDILRDSGRDFAVKEISDPEFLLELERKLEEELAEYLESKEAEE CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHH LADLLEVIYRIAELRGFSKEALESVRLKKRKESGGFEKNLILLNMADENRLCRGPPAASK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC EFPRVVFRPENSEVIEKYGVRMRIYTTRADSPNAAVLYQETESGHAEEFVHEKSDFLYYI CCCEEEECCCCHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCCEEEEE LEGSGTWIVEDREFEVRSGDVVVVPAGKRFWFRGNLKQICITAPAWDERYERHIRDIEL EECCCEEEEECCEEEEECCCEEEEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure TSFTEHGHKAIRDRIPDILRDSGRDFAVKEISDPEFLLELERKLEEELAEYLESKEAEE CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHH LADLLEVIYRIAELRGFSKEALESVRLKKRKESGGFEKNLILLNMADENRLCRGPPAASK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC EFPRVVFRPENSEVIEKYGVRMRIYTTRADSPNAAVLYQETESGHAEEFVHEKSDFLYYI CCCEEEECCCCHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCCEEEEE LEGSGTWIVEDREFEVRSGDVVVVPAGKRFWFRGNLKQICITAPAWDERYERHIRDIEL EECCCEEEEECCEEEEECCCEEEEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA