| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228000
Identifier: 21228000
GI number: 21228000
Start: 2258636
End: 2259415
Strand: Direct
Name: 21228000
Synonym: MM_1898
Alternate gene names: NA
Gene position: 2258636-2259415 (Clockwise)
Preceding gene: 21227999
Following gene: 21228003
Centisome position: 55.14
GC content: 39.87
Gene sequence:
>780_bases ATGAGAAAGCATATGGACAAAGAACAGATACAGCAGGAACGTTTGGACCTGCTTTCCCAGATTAACGAGATTCTGGATTT TCCTTTGATTTTGCTGTCAATAGTGTGGTTAATCCTTATTATTGTTGATTTTGTTTACGGGCTTTCCTCACGCCTGCAAA CGGCAAGTACTGTTATCTGGGGTATTTTTATAGCTGATTTTTTTGTTGAACTGTATATTGCTCCGAAAAAAAAGGTTTAT TTAAAGGAAAACTGGCTTGTTGCTCTTTCTCTCTTCCTTCCTGCTCTGAGGATATTAAAATTATTCCGCGGTTTCAGGCT ATTTAAACTTTCAAGTTTCATCCGGTCATTTAACCTTGCCAGAATTCTTTCTTCATTTAACAGGAGTATAAGGACTGTCA GAAAGGCTGTGAGACAGAGAGGGCTGGAATATGTCCTTCTGCTTACGGCTCTGGTAACTTCTATCGGTGCAGCAGGGATG TACAGCTTTGAAAGACCTGGCCTCAGTTCCTACTGGGATGCTTTCTGGTGGACAGCAATGATTATGACGACAATTGGAAG CGATTACTGGCCTGAAACCTTTGAAGGACGGATTTTAACTTTTTTCTTATCCGTTTACGCTTTTGCAATTTTTGGATATA TCACAGCAGCCCTTGCCAGTCTTCTTATTGGAAAAGAGAAGGAAGAATCTTCTAAAGAAATTGTGGAACTGCGGAAGGAA GTGCAGAGGCTTTCCAGTGAAATAAGCAGGTTTTCAGAAAAGGAAAAAAAGCAAATTTAA
Upstream 100 bases:
>100_bases GTCTGTCTGAGAACCTTAAATTATCTCATGAAACTAATAATATTCACAGATTTTTTCTTTTACTATAATGCACACTTCTT TATTTTTTATATAATTTGAG
Downstream 100 bases:
>100_bases GTCTTCCTAAAATAAAGCTGAGTAAAATTTTAATGAATTTGTGGTCTGTACCTGACTCTCTTTTATTTTCAAGCCTCTCC AGGGGTTTTAATGAGTCTGA
Product: potassium channel protein
Products: NA
Alternate protein names: Potassium Channel Protein; Voltage-Gated Potassium Channel Protein; Ion Transport 2 Domain Protein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIWGIFIADFFVELYIAPKKKVY LKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLARILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGM YSFERPGLSSYWDAFWWTAMIMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE VQRLSSEISRFSEKEKKQI
Sequences:
>Translated_259_residues MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIWGIFIADFFVELYIAPKKKVY LKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLARILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGM YSFERPGLSSYWDAFWWTAMIMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE VQRLSSEISRFSEKEKKQI >Mature_259_residues MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIWGIFIADFFVELYIAPKKKVY LKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLARILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGM YSFERPGLSSYWDAFWWTAMIMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE VQRLSSEISRFSEKEKKQI
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30128; Mature: 30128
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIFIADFFVELYIAPKKKVYLKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLA HHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGMYSFERPGLSSYWDAFWWTAM HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH IMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VQRLSSEISRFSEKEKKQI HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIFIADFFVELYIAPKKKVYLKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLA HHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGMYSFERPGLSSYWDAFWWTAM HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH IMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VQRLSSEISRFSEKEKKQI HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA