Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228000

Identifier: 21228000

GI number: 21228000

Start: 2258636

End: 2259415

Strand: Direct

Name: 21228000

Synonym: MM_1898

Alternate gene names: NA

Gene position: 2258636-2259415 (Clockwise)

Preceding gene: 21227999

Following gene: 21228003

Centisome position: 55.14

GC content: 39.87

Gene sequence:

>780_bases
ATGAGAAAGCATATGGACAAAGAACAGATACAGCAGGAACGTTTGGACCTGCTTTCCCAGATTAACGAGATTCTGGATTT
TCCTTTGATTTTGCTGTCAATAGTGTGGTTAATCCTTATTATTGTTGATTTTGTTTACGGGCTTTCCTCACGCCTGCAAA
CGGCAAGTACTGTTATCTGGGGTATTTTTATAGCTGATTTTTTTGTTGAACTGTATATTGCTCCGAAAAAAAAGGTTTAT
TTAAAGGAAAACTGGCTTGTTGCTCTTTCTCTCTTCCTTCCTGCTCTGAGGATATTAAAATTATTCCGCGGTTTCAGGCT
ATTTAAACTTTCAAGTTTCATCCGGTCATTTAACCTTGCCAGAATTCTTTCTTCATTTAACAGGAGTATAAGGACTGTCA
GAAAGGCTGTGAGACAGAGAGGGCTGGAATATGTCCTTCTGCTTACGGCTCTGGTAACTTCTATCGGTGCAGCAGGGATG
TACAGCTTTGAAAGACCTGGCCTCAGTTCCTACTGGGATGCTTTCTGGTGGACAGCAATGATTATGACGACAATTGGAAG
CGATTACTGGCCTGAAACCTTTGAAGGACGGATTTTAACTTTTTTCTTATCCGTTTACGCTTTTGCAATTTTTGGATATA
TCACAGCAGCCCTTGCCAGTCTTCTTATTGGAAAAGAGAAGGAAGAATCTTCTAAAGAAATTGTGGAACTGCGGAAGGAA
GTGCAGAGGCTTTCCAGTGAAATAAGCAGGTTTTCAGAAAAGGAAAAAAAGCAAATTTAA

Upstream 100 bases:

>100_bases
GTCTGTCTGAGAACCTTAAATTATCTCATGAAACTAATAATATTCACAGATTTTTTCTTTTACTATAATGCACACTTCTT
TATTTTTTATATAATTTGAG

Downstream 100 bases:

>100_bases
GTCTTCCTAAAATAAAGCTGAGTAAAATTTTAATGAATTTGTGGTCTGTACCTGACTCTCTTTTATTTTCAAGCCTCTCC
AGGGGTTTTAATGAGTCTGA

Product: potassium channel protein

Products: NA

Alternate protein names: Potassium Channel Protein; Voltage-Gated Potassium Channel Protein; Ion Transport 2 Domain Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIWGIFIADFFVELYIAPKKKVY
LKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLARILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGM
YSFERPGLSSYWDAFWWTAMIMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE
VQRLSSEISRFSEKEKKQI

Sequences:

>Translated_259_residues
MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIWGIFIADFFVELYIAPKKKVY
LKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLARILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGM
YSFERPGLSSYWDAFWWTAMIMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE
VQRLSSEISRFSEKEKKQI
>Mature_259_residues
MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIWGIFIADFFVELYIAPKKKVY
LKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLARILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGM
YSFERPGLSSYWDAFWWTAMIMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE
VQRLSSEISRFSEKEKKQI

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30128; Mature: 30128

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFIADFFVELYIAPKKKVYLKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLA
HHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGMYSFERPGLSSYWDAFWWTAM
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VQRLSSEISRFSEKEKKQI
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKHMDKEQIQQERLDLLSQINEILDFPLILLSIVWLILIIVDFVYGLSSRLQTASTVIW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFIADFFVELYIAPKKKVYLKENWLVALSLFLPALRILKLFRGFRLFKLSSFIRSFNLA
HHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RILSSFNRSIRTVRKAVRQRGLEYVLLLTALVTSIGAAGMYSFERPGLSSYWDAFWWTAM
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IMTTIGSDYWPETFEGRILTFFLSVYAFAIFGYITAALASLLIGKEKEESSKEIVELRKE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VQRLSSEISRFSEKEKKQI
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA