Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228003

Identifier: 21228003

GI number: 21228003

Start: 2261078

End: 2261422

Strand: Direct

Name: 21228003

Synonym: MM_1901

Alternate gene names: NA

Gene position: 2261078-2261422 (Clockwise)

Preceding gene: 21228000

Following gene: 21228006

Centisome position: 55.2

GC content: 39.71

Gene sequence:

>345_bases
ATGGCATCAACGGTTGCGTCAGTAAGCGCATGTTCTTGCGATAAGAAATGTGACTGTGACGACAGATATGACTTTAAAGA
CAAATGTGACTTTAAAAAGAAATGCGACTTTAAAGACAGGTTCGACTTTAAAGACAAATGTGACTTTAAAGAGAAGTGCA
AGATTAAAGACAGGTGCGACTTTAAAGACAAGTGCGCTCCTAAAGATAAGTGTGCCCCTAAAAACAAGTGCGCAATCAAG
TGTTACAACTACACTGGCTATAAGTTCAACAGCTGTTTCTCTATCCTGTGGATGTTTTTCGGAGACGTCTTTGACTGCGG
GAAATGCTTTTCTAAATGCTGCTAA

Upstream 100 bases:

>100_bases
CTTAAAATAATATCAATAAGATGAAAATCTGGGAGTGTATAAAATGTTAAAATTAAGATTTAGAAAGGCACTGGTTCTTT
TGCTAGCAGTCTTTTTTGTA

Downstream 100 bases:

>100_bases
TTGAACATAAAAAACTAATTAAAAGACTGAACCAGACATAAATTAAAGCTAACTGCGGCCTGTTAAAACAAAACGAATTG
TTACGAAATTTCATTATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MASTVASVSACSCDKKCDCDDRYDFKDKCDFKKKCDFKDRFDFKDKCDFKEKCKIKDRCDFKDKCAPKDKCAPKNKCAIK
CYNYTGYKFNSCFSILWMFFGDVFDCGKCFSKCC

Sequences:

>Translated_114_residues
MASTVASVSACSCDKKCDCDDRYDFKDKCDFKKKCDFKDRFDFKDKCDFKEKCKIKDRCDFKDKCAPKDKCAPKNKCAIK
CYNYTGYKFNSCFSILWMFFGDVFDCGKCFSKCC
>Mature_113_residues
ASTVASVSACSCDKKCDCDDRYDFKDKCDFKKKCDFKDRFDFKDKCDFKEKCKIKDRCDFKDKCAPKDKCAPKNKCAIKC
YNYTGYKFNSCFSILWMFFGDVFDCGKCFSKCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13330; Mature: 13199

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

15.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
17.5 %Cys+Met (Translated Protein)
15.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
16.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTVASVSACSCDKKCDCDDRYDFKDKCDFKKKCDFKDRFDFKDKCDFKEKCKIKDRCD
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
FKDKCAPKDKCAPKNKCAIKCYNYTGYKFNSCFSILWMFFGDVFDCGKCFSKCC
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASTVASVSACSCDKKCDCDDRYDFKDKCDFKKKCDFKDRFDFKDKCDFKEKCKIKDRCD
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
FKDKCAPKDKCAPKNKCAIKCYNYTGYKFNSCFSILWMFFGDVFDCGKCFSKCC
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA