Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227999

Identifier: 21227999

GI number: 21227999

Start: 2256297

End: 2258159

Strand: Direct

Name: 21227999

Synonym: MM_1897

Alternate gene names: NA

Gene position: 2256297-2258159 (Clockwise)

Preceding gene: 21227991

Following gene: 21228000

Centisome position: 55.08

GC content: 43.59

Gene sequence:

>1863_bases
ATGATCACAACCGGCGATATTACTGAAACCATTACATGTGATATCATCGGAAATGCGGTCGTTGTCGAAGAAATGGAATT
TGAGGATAACATGAGTGATGATAACATGAGTAATGTTACTGACGGTATGAATAACGCCACCGGTAATACGACTGATGTTA
GCAGTGATATGAATATTCCCGAAACGCTTGAGGTAAGCGGGAAGATTATTCTGATCAAAGATATGGGTAACATGACAGAA
AAAGCCGTCATGGCCGGAAAAGTTGATGGTATACCTGGAAGCGTGGTCATCTTCGGAAAAACGGATGGCATGGCAGAAGG
TATGGATGATGCCACTGAAAATATGACTGAGGCTGGAAATAACGTTACTGAGGCTGGAAATAACGTTACTGAGACTGCCA
ATAACATTACTGAGACTGTAAATAATGTTACTGAGACTGCCGATAACGCAAATAATGCTACAAATAACGCTACCAACGAT
ACCAGTAATATGGATGTCTCCAGAAACATAACCATAATTACAACCGGGAATATGACCGGAACAATCATGTTGAACACGTC
ACAGGGCATGGATAATGCCAGCGGTATGAATAACATGACAGAAGGCATGGACAACATGACTGTACTTACGGCTGGAAATA
TGACCGGAACCGTGACCGGCGATATGACCCGAAAAATGGTTGTAATCAAAAACATAGCTGATGCCGCCGAAATATCCGAT
GCAATAGTCAATCTCACTGAAACGGACACAGGCACGGCTAATATGACTGAACCCGCTGCATACAATTTCACCGGGAACAT
GGTCATAGTCAGAAGTACGGATGATGTACCCGAAATAGATGAAGAGGATATAGATGATCTGATTGCGATGGACGGAAATA
CGGCTATTATCGGGGCTATGGATAACACAACCGAAATGGAAGAAAACACCAATCAGGGCGTGGAAAACGTAACCAAGAAA
ATGGTCGCAGTCAGAAATATCGATGATATGGTCAGAATCGTGACATGGACGGTTATCTGCAACATAACTCAGAACACGGC
TACCATTGAAGATATTGGTGATCTGGTCGAAAAGATGACTAACGTGACCACTGGAAATGTGACCAACGTAACTGACAATG
TTACAGGCAACATGACCAATGTGACCACGGACAACATGACCGGTGTAGCTGATAATGTTACAGGCAACATGACCAATGTG
ACCACGGACAACATGACCGGTGTAGCTGATAATGTTACAGACAACATGACCGGTAATATGACTGGCGTGACCGGGGACCA
GACCGGCAATGTTTCAAACGTGCCACTCAAGCTTGAGAGCATCCAGGAAATCGAAAACGACCGGGAATTCAATAAAATGT
GGTTCGTCTACATAAACGGGGAACCAGCTCAACAGGATTTCGGGATGAACAAAGTAAATGAAGGAGACGTAATAAGCTTC
TGGTACACAACTGAAGATGATGGAAATGCGGTACTTGGAGATGCTCTTTACGTAGCTAATATCACAGTTGTCGATGAAGC
AGAAGAGCAGGAGAACGAAAATGAGGATCTTACTGTATTATTCGACAATACGGTAAACCTCACTGAAGGGACCTTTACCT
TCACGCCTGAAGGCTCTAACCAGGAGTCTGAAATAGATAACTTTACTGACATTGGAGCTCTTAATGCGAGCGGGCTTGAA
TTTGTCGCGTCAGTTATGGACAATGCGACTGACGACACCAGTGACGACATGGATGATATGAATAACGACTACATGGGTGA
AGACGATACCAATAACATGGACGAAGATACGGGTACAGAAGGCATGAATGAAAACGACACGGATGACATGAATGGAGACG
ACAATACAAATAACGACATGTAA

Upstream 100 bases:

>100_bases
GATGAAATTGATGGTTTTCCTGTTAGTATTATGTCTGGCTCTGCCTATTGTGGCCGTACAGGCACAGACAGACGTATTCG
GAAACATGGAGAACATAAAC

Downstream 100 bases:

>100_bases
TTGATCAACAGTGTCTTCCGATTGGAAACTCTGTTCTGGAAGTCTGGGCTGTAAGTCTATATGATTTGCAGCTCTCTTCT
TTTTTTCTAATATGGCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MITTGDITETITCDIIGNAVVVEEMEFEDNMSDDNMSNVTDGMNNATGNTTDVSSDMNIPETLEVSGKIILIKDMGNMTE
KAVMAGKVDGIPGSVVIFGKTDGMAEGMDDATENMTEAGNNVTEAGNNVTETANNITETVNNVTETADNANNATNNATND
TSNMDVSRNITIITTGNMTGTIMLNTSQGMDNASGMNNMTEGMDNMTVLTAGNMTGTVTGDMTRKMVVIKNIADAAEISD
AIVNLTETDTGTANMTEPAAYNFTGNMVIVRSTDDVPEIDEEDIDDLIAMDGNTAIIGAMDNTTEMEENTNQGVENVTKK
MVAVRNIDDMVRIVTWTVICNITQNTATIEDIGDLVEKMTNVTTGNVTNVTDNVTGNMTNVTTDNMTGVADNVTGNMTNV
TTDNMTGVADNVTDNMTGNMTGVTGDQTGNVSNVPLKLESIQEIENDREFNKMWFVYINGEPAQQDFGMNKVNEGDVISF
WYTTEDDGNAVLGDALYVANITVVDEAEEQENENEDLTVLFDNTVNLTEGTFTFTPEGSNQESEIDNFTDIGALNASGLE
FVASVMDNATDDTSDDMDDMNNDYMGEDDTNNMDEDTGTEGMNENDTDDMNGDDNTNNDM

Sequences:

>Translated_620_residues
MITTGDITETITCDIIGNAVVVEEMEFEDNMSDDNMSNVTDGMNNATGNTTDVSSDMNIPETLEVSGKIILIKDMGNMTE
KAVMAGKVDGIPGSVVIFGKTDGMAEGMDDATENMTEAGNNVTEAGNNVTETANNITETVNNVTETADNANNATNNATND
TSNMDVSRNITIITTGNMTGTIMLNTSQGMDNASGMNNMTEGMDNMTVLTAGNMTGTVTGDMTRKMVVIKNIADAAEISD
AIVNLTETDTGTANMTEPAAYNFTGNMVIVRSTDDVPEIDEEDIDDLIAMDGNTAIIGAMDNTTEMEENTNQGVENVTKK
MVAVRNIDDMVRIVTWTVICNITQNTATIEDIGDLVEKMTNVTTGNVTNVTDNVTGNMTNVTTDNMTGVADNVTGNMTNV
TTDNMTGVADNVTDNMTGNMTGVTGDQTGNVSNVPLKLESIQEIENDREFNKMWFVYINGEPAQQDFGMNKVNEGDVISF
WYTTEDDGNAVLGDALYVANITVVDEAEEQENENEDLTVLFDNTVNLTEGTFTFTPEGSNQESEIDNFTDIGALNASGLE
FVASVMDNATDDTSDDMDDMNNDYMGEDDTNNMDEDTGTEGMNENDTDDMNGDDNTNNDM
>Mature_620_residues
MITTGDITETITCDIIGNAVVVEEMEFEDNMSDDNMSNVTDGMNNATGNTTDVSSDMNIPETLEVSGKIILIKDMGNMTE
KAVMAGKVDGIPGSVVIFGKTDGMAEGMDDATENMTEAGNNVTEAGNNVTETANNITETVNNVTETADNANNATNNATND
TSNMDVSRNITIITTGNMTGTIMLNTSQGMDNASGMNNMTEGMDNMTVLTAGNMTGTVTGDMTRKMVVIKNIADAAEISD
AIVNLTETDTGTANMTEPAAYNFTGNMVIVRSTDDVPEIDEEDIDDLIAMDGNTAIIGAMDNTTEMEENTNQGVENVTKK
MVAVRNIDDMVRIVTWTVICNITQNTATIEDIGDLVEKMTNVTTGNVTNVTDNVTGNMTNVTTDNMTGVADNVTGNMTNV
TTDNMTGVADNVTDNMTGNMTGVTGDQTGNVSNVPLKLESIQEIENDREFNKMWFVYINGEPAQQDFGMNKVNEGDVISF
WYTTEDDGNAVLGDALYVANITVVDEAEEQENENEDLTVLFDNTVNLTEGTFTFTPEGSNQESEIDNFTDIGALNASGLE
FVASVMDNATDDTSDDMDDMNNDYMGEDDTNNMDEDTGTEGMNENDTDDMNGDDNTNNDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66579; Mature: 66579

Theoretical pI: Translated: 3.27; Mature: 3.27

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTGDITETITCDIIGNAVVVEEMEFEDNMSDDNMSNVTDGMNNATGNTTDVSSDMNIP
CCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
ETLEVSGKIILIKDMGNMTEKAVMAGKVDGIPGSVVIFGKTDGMAEGMDDATENMTEAGN
CEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCC
NVTEAGNNVTETANNITETVNNVTETADNANNATNNATNDTSNMDVSRNITIITTGNMTG
CHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCEE
TIMLNTSQGMDNASGMNNMTEGMDNMTVLTAGNMTGTVTGDMTRKMVVIKNIADAAEISD
EEEEECCCCCCCCCCCCHHHHCCCCEEEEEECCCEEEEECCCCEEEEEEHHHHHHHHHHH
AIVNLTETDTGTANMTEPAAYNFTGNMVIVRSTDDVPEIDEEDIDDLIAMDGNTAIIGAM
HHEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHHHEEECCCEEEEEEC
DNTTEMEENTNQGVENVTKKMVAVRNIDDMVRIVTWTVICNITQNTATIEDIGDLVEKMT
CCCCHHHHHHCCHHHHHHHHHHHHHCHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHH
NVTTGNVTNVTDNVTGNMTNVTTDNMTGVADNVTGNMTNVTTDNMTGVADNVTDNMTGNM
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
TGVTGDQTGNVSNVPLKLESIQEIENDREFNKMWFVYINGEPAQQDFGMNKVNEGDVISF
EECCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEE
WYTTEDDGNAVLGDALYVANITVVDEAEEQENENEDLTVLFDNTVNLTEGTFTFTPEGSN
EEEECCCCCEEEECEEEEEEEEEEECCHHHCCCCCCEEEEECCEEEEECCEEEECCCCCC
QESEIDNFTDIGALNASGLEFVASVMDNATDDTSDDMDDMNNDYMGEDDTNNMDEDTGTE
CHHHCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
GMNENDTDDMNGDDNTNNDM
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITTGDITETITCDIIGNAVVVEEMEFEDNMSDDNMSNVTDGMNNATGNTTDVSSDMNIP
CCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
ETLEVSGKIILIKDMGNMTEKAVMAGKVDGIPGSVVIFGKTDGMAEGMDDATENMTEAGN
CEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCC
NVTEAGNNVTETANNITETVNNVTETADNANNATNNATNDTSNMDVSRNITIITTGNMTG
CHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCEE
TIMLNTSQGMDNASGMNNMTEGMDNMTVLTAGNMTGTVTGDMTRKMVVIKNIADAAEISD
EEEEECCCCCCCCCCCCHHHHCCCCEEEEEECCCEEEEECCCCEEEEEEHHHHHHHHHHH
AIVNLTETDTGTANMTEPAAYNFTGNMVIVRSTDDVPEIDEEDIDDLIAMDGNTAIIGAM
HHEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCHHHHHHHEEECCCEEEEEEC
DNTTEMEENTNQGVENVTKKMVAVRNIDDMVRIVTWTVICNITQNTATIEDIGDLVEKMT
CCCCHHHHHHCCHHHHHHHHHHHHHCHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHH
NVTTGNVTNVTDNVTGNMTNVTTDNMTGVADNVTGNMTNVTTDNMTGVADNVTDNMTGNM
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
TGVTGDQTGNVSNVPLKLESIQEIENDREFNKMWFVYINGEPAQQDFGMNKVNEGDVISF
EECCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEE
WYTTEDDGNAVLGDALYVANITVVDEAEEQENENEDLTVLFDNTVNLTEGTFTFTPEGSN
EEEECCCCCEEEECEEEEEEEEEEECCHHHCCCCCCEEEEECCEEEEECCEEEECCCCCC
QESEIDNFTDIGALNASGLEFVASVMDNATDDTSDDMDDMNNDYMGEDDTNNMDEDTGTE
CHHHCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
GMNENDTDDMNGDDNTNNDM
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA