Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227977

Identifier: 21227977

GI number: 21227977

Start: 2228317

End: 2230443

Strand: Direct

Name: 21227977

Synonym: MM_1875

Alternate gene names: NA

Gene position: 2228317-2230443 (Clockwise)

Preceding gene: 21227976

Following gene: 21227978

Centisome position: 54.4

GC content: 43.72

Gene sequence:

>2127_bases
ATGATTGGAAGACGTGGATGTACTAATAAAAAAATCAAAACAAAAATTACCAGTTTTGTTTTTCTGACAGTACTGGTCTT
TTCCCTGTGTTTCATCCCGGGGATGGCAGCTGAAACTGACAGTTCGGAGTTGATGGCTCAGGTCTTTGCCGCAGCCGAAA
GTAATCTCGGGAATATCGGACCTGAAAACACACTTATAATAACAGATCTTGGCTCTCCTGCAGAGTCTTATGTTTTTCTG
GATAATTTTTACTCGGAATTTAACGGAAGGAACCTGAAATATACCGATAATCTGCTTGTTGTCCAGAACGCAAGGAATGC
CCCTCTCTGGTTTGCTTTCTTTGACAAAGCAAGCGGAAAATGTGCTTATATTGAGGTTACATACGGAGACGAGGAGAAGA
TCAGCTATCAGGTAACGGAAAATATAAACTTTAATGGACTTTCGAAAAATAAGAAGTCCATAGAAGCTTGGAATCAAAAA
GTGAATTCTGCTGTTTTTAAAGGGCATGAATTTGCCATTCTTACGATCTCTAATGCCTGGGCTACGGGAAATCTCGATTA
TGAACTTATGCAGTGCCTGGAAATACACAACCACTTCTGTCCCGGAGTCTCAAGCGGTTTTGTGCTTGCAAACTGGATGG
AAGAAAATTATCCGCTTAAAGAAGGGGTAAGTTATACGGTCTTTTCCTGCCCCAACTGGTGTAAAGAAGATGTTTTTGTC
AAGCGCTGGGATGCCACCCCTGGAAAAGGAGGAATTTTTGTCTCTGCGCTGACGGATGAAGAGATCGAAACAATCGGGAA
TTCTCCTGCCGGAATCTTTGTGGTTACGGATAAGAACGCCGGAACAATGAAAGCAGTAGCTCTCGGGTTTGACTTTGATG
TCGTGAACGCGAAGTGCGGTGCAAAAAAGGATGATCCTGCATGGATTTCAAAATACCTGGCGGATCTCTGGCTTATGGAC
AGAGGCAATTGGGATGAAGAAGGCCTTGTTACGGAAATCGCGGTTATCGACATTGATAAGGATACCCTTGGTGAAATGAA
GCGGGCAGGTTCCAATCCCTATGAAGTCCTCGGGCTTCTCAACTCAAATGGAAATGTTAATCCCCCAGCTGAAGATAAGG
AACTGATGGATCAGGTCTTTTCCGCAGCCGAAGCAGAGCTGGGGACTCTCGGACCTGAAAACACTTTTATAATGACTGAT
ATCGGCTCTCCTGCAGAGTCCGATTTTTTTTTAAATAACTTTTATTCTGAGTTTTATGGAAAAGAGCTGAAATATACAAA
GAATCTGCTTGTAGTCCAGAACGCAAGAAACGCCCCTCTCTGGTTTGCTTTCTTTGACAAAGCAAGCGGAAAATGTGCCT
ACATTGAGGTTACATATGAAAACGAAGATAAAATCAGCTATCAGGCAACGGAAAATATAAACTTTAATGAGCTTTCCGCA
AGCCAGGAGTCCATAGCAGCCTGGAGTGAAAAAGTAAACTCAAAGATTTTTAACGGGCGCGAATTTGCCATTCTTACAAT
TTCCAATGCCTGGGCTACGGGAAATCTCGATTATGAACTTATGCAGTGCCTGGAGATACACAACCACTTCTGTCCCGGAG
TTTCGAGCGGCTTTGTGCTTGCAAACTGGATGGAAGAAAATTATCCGCTTGAAGAGGGGGTAAGTTATACGGTTTTCTCC
ACTCCTCACTGGTGTAAGGATGATGTTTTTGTCAAGCGCTGGGATGCTACTCCTGGAAAAGGAGGGGTTTTTGTCTCTGA
ATTGACAGACGAGGAACTTGAGGCAATTGGAAGCGACCTTGCTGGAGTTTTCGTTGTCAGGGATAAGAATGCAGGAACTC
TGAAGGCAGTTGTGCTCGGGTACAACTCTGATCTTGCGAGTGCAAATTGCGGGGCAAAAGAAAGTGATCCTGACTGGGTT
TCAAAATATATGAAGGATCTCTGGCTTATGAACCCTGAAAATTGGGACGGTCTTGTTACAGAGATCGCTGTCATTGATAT
CGATGATGCTGCCCTGAACGAAATGAAACAGGCAGATACCAATCCTTATGTAGTTATAGGGCTTCTCAACCTCGTAGAGG
ATGTCAGCCCTCAGAATCTGGAATCCACTGAAGCAGTAACTGCATAA

Upstream 100 bases:

>100_bases
TAAAATCCATATTTTGTTCTATTTATTAAGCTATATATTCTAAAAAATGCTACCCAATGCAGTATTAAATAAATGACTTA
TGGGCAGAAGAGGTAAAAAT

Downstream 100 bases:

>100_bases
GCAAAATACAAGCCTGGGATAGCGTGAAAAAGTTTGTGGAATCTTTAGTAGATTCCTCTTTACCTTATTTTTTATCTTTC
CTGTGTTTTTCTTTCTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
MIGRRGCTNKKIKTKITSFVFLTVLVFSLCFIPGMAAETDSSELMAQVFAAAESNLGNIGPENTLIITDLGSPAESYVFL
DNFYSEFNGRNLKYTDNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYGDEEKISYQVTENINFNGLSKNKKSIEAWNQK
VNSAVFKGHEFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLKEGVSYTVFSCPNWCKEDVFV
KRWDATPGKGGIFVSALTDEEIETIGNSPAGIFVVTDKNAGTMKAVALGFDFDVVNAKCGAKKDDPAWISKYLADLWLMD
RGNWDEEGLVTEIAVIDIDKDTLGEMKRAGSNPYEVLGLLNSNGNVNPPAEDKELMDQVFSAAEAELGTLGPENTFIMTD
IGSPAESDFFLNNFYSEFYGKELKYTKNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYENEDKISYQATENINFNELSA
SQESIAAWSEKVNSKIFNGREFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLEEGVSYTVFS
TPHWCKDDVFVKRWDATPGKGGVFVSELTDEELEAIGSDLAGVFVVRDKNAGTLKAVVLGYNSDLASANCGAKESDPDWV
SKYMKDLWLMNPENWDGLVTEIAVIDIDDAALNEMKQADTNPYVVIGLLNLVEDVSPQNLESTEAVTA

Sequences:

>Translated_708_residues
MIGRRGCTNKKIKTKITSFVFLTVLVFSLCFIPGMAAETDSSELMAQVFAAAESNLGNIGPENTLIITDLGSPAESYVFL
DNFYSEFNGRNLKYTDNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYGDEEKISYQVTENINFNGLSKNKKSIEAWNQK
VNSAVFKGHEFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLKEGVSYTVFSCPNWCKEDVFV
KRWDATPGKGGIFVSALTDEEIETIGNSPAGIFVVTDKNAGTMKAVALGFDFDVVNAKCGAKKDDPAWISKYLADLWLMD
RGNWDEEGLVTEIAVIDIDKDTLGEMKRAGSNPYEVLGLLNSNGNVNPPAEDKELMDQVFSAAEAELGTLGPENTFIMTD
IGSPAESDFFLNNFYSEFYGKELKYTKNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYENEDKISYQATENINFNELSA
SQESIAAWSEKVNSKIFNGREFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLEEGVSYTVFS
TPHWCKDDVFVKRWDATPGKGGVFVSELTDEELEAIGSDLAGVFVVRDKNAGTLKAVVLGYNSDLASANCGAKESDPDWV
SKYMKDLWLMNPENWDGLVTEIAVIDIDDAALNEMKQADTNPYVVIGLLNLVEDVSPQNLESTEAVTA
>Mature_708_residues
MIGRRGCTNKKIKTKITSFVFLTVLVFSLCFIPGMAAETDSSELMAQVFAAAESNLGNIGPENTLIITDLGSPAESYVFL
DNFYSEFNGRNLKYTDNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYGDEEKISYQVTENINFNGLSKNKKSIEAWNQK
VNSAVFKGHEFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLKEGVSYTVFSCPNWCKEDVFV
KRWDATPGKGGIFVSALTDEEIETIGNSPAGIFVVTDKNAGTMKAVALGFDFDVVNAKCGAKKDDPAWISKYLADLWLMD
RGNWDEEGLVTEIAVIDIDKDTLGEMKRAGSNPYEVLGLLNSNGNVNPPAEDKELMDQVFSAAEAELGTLGPENTFIMTD
IGSPAESDFFLNNFYSEFYGKELKYTKNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYENEDKISYQATENINFNELSA
SQESIAAWSEKVNSKIFNGREFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLEEGVSYTVFS
TPHWCKDDVFVKRWDATPGKGGVFVSELTDEELEAIGSDLAGVFVVRDKNAGTLKAVVLGYNSDLASANCGAKESDPDWV
SKYMKDLWLMNPENWDGLVTEIAVIDIDDAALNEMKQADTNPYVVIGLLNLVEDVSPQNLESTEAVTA

Specific function: Unknown

COG id: COG5643

COG function: function code R; Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78466; Mature: 78466

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRRGCTNKKIKTKITSFVFLTVLVFSLCFIPGMAAETDSSELMAQVFAAAESNLGNIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PENTLIITDLGSPAESYVFLDNFYSEFNGRNLKYTDNLLVVQNARNAPLWFAFFDKASGK
CCCEEEEEECCCCCHHEEEHHHHHHHHCCCCEEEECCEEEEECCCCCCEEEEEEECCCCC
CAYIEVTYGDEEKISYQVTENINFNGLSKNKKSIEAWNQKVNSAVFKGHEFAILTISNAW
EEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCE
ATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLKEGVSYTVFSCPNWCKEDVFV
ECCCCCHHHHHHHHHHHHCCCCCCCCCEEEECHHCCCCHHHCCCEEEECCCCCCCCCCEE
KRWDATPGKGGIFVSALTDEEIETIGNSPAGIFVVTDKNAGTMKAVALGFDFDVVNAKCG
EEECCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCEEEEECCCC
AKKDDPAWISKYLADLWLMDRGNWDEEGLVTEIAVIDIDKDTLGEMKRAGSNPYEVLGLL
CCCCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEEEEE
NSNGNVNPPAEDKELMDQVFSAAEAELGTLGPENTFIMTDIGSPAESDFFLNNFYSEFYG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC
KELKYTKNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYENEDKISYQATENINFNELSA
CCHHCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCHHHCCC
SQESIAAWSEKVNSKIFNGREFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVL
CHHHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHCCCCCCCCCEE
ANWMEENYPLEEGVSYTVFSTPHWCKDDVFVKRWDATPGKGGVFVSELTDEELEAIGSDL
EECHHCCCCHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHCCCC
AGVFVVRDKNAGTLKAVVLGYNSDLASANCGAKESDPDWVSKYMKDLWLMNPENWDGLVT
EEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEE
EIAVIDIDDAALNEMKQADTNPYVVIGLLNLVEDVSPQNLESTEAVTA
EEEEEECCHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGRRGCTNKKIKTKITSFVFLTVLVFSLCFIPGMAAETDSSELMAQVFAAAESNLGNIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PENTLIITDLGSPAESYVFLDNFYSEFNGRNLKYTDNLLVVQNARNAPLWFAFFDKASGK
CCCEEEEEECCCCCHHEEEHHHHHHHHCCCCEEEECCEEEEECCCCCCEEEEEEECCCCC
CAYIEVTYGDEEKISYQVTENINFNGLSKNKKSIEAWNQKVNSAVFKGHEFAILTISNAW
EEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCE
ATGNLDYELMQCLEIHNHFCPGVSSGFVLANWMEENYPLKEGVSYTVFSCPNWCKEDVFV
ECCCCCHHHHHHHHHHHHCCCCCCCCCEEEECHHCCCCHHHCCCEEEECCCCCCCCCCEE
KRWDATPGKGGIFVSALTDEEIETIGNSPAGIFVVTDKNAGTMKAVALGFDFDVVNAKCG
EEECCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCEEEEECCCC
AKKDDPAWISKYLADLWLMDRGNWDEEGLVTEIAVIDIDKDTLGEMKRAGSNPYEVLGLL
CCCCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEEEEE
NSNGNVNPPAEDKELMDQVFSAAEAELGTLGPENTFIMTDIGSPAESDFFLNNFYSEFYG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC
KELKYTKNLLVVQNARNAPLWFAFFDKASGKCAYIEVTYENEDKISYQATENINFNELSA
CCHHCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCHHHCCC
SQESIAAWSEKVNSKIFNGREFAILTISNAWATGNLDYELMQCLEIHNHFCPGVSSGFVL
CHHHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHCCCCCCCCCEE
ANWMEENYPLEEGVSYTVFSTPHWCKDDVFVKRWDATPGKGGVFVSELTDEELEAIGSDL
EECHHCCCCHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHCCCC
AGVFVVRDKNAGTLKAVVLGYNSDLASANCGAKESDPDWVSKYMKDLWLMNPENWDGLVT
EEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEE
EIAVIDIDDAALNEMKQADTNPYVVIGLLNLVEDVSPQNLESTEAVTA
EEEEEECCHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA