| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yeiA [C]
Identifier: 21227897
GI number: 21227897
Start: 2144051
End: 2145190
Strand: Reverse
Name: yeiA [C]
Synonym: MM_1795
Alternate gene names: 21227897
Gene position: 2145190-2144051 (Counterclockwise)
Preceding gene: 21227898
Following gene: 21227894
Centisome position: 52.37
GC content: 49.39
Gene sequence:
>1140_bases ATGAATAAAGTCTCCATAGTTCCCTGTTCTGATTATTCCAGCGCAAAAGAAGCAATAGCCAGAGCTCTGGACCTTCTGGG CGGTCTTGAAAATGTAATCGGCAAGGGAGACAGCGTGCTCCTGAAGCCAAATATCCTTGCAGCAAGCCCCCCCGAAGCCG CCGCAACTACCCACCCGGCTGTGGTCGCAGCGATGTGCGAGTTCGTTCTCAGCGCAGGAGGGAAGCCAGTAGTAGGGGAC GGAGCCGGGATCTCAAGACCTGGGGCTACTGCAAAAGCCCTGAAAACCTCAGGGATAGAAGAAGCTGCCTTAAGAGCAGG AGCCAGGGTTGTGAACTTTGAGACCGCAGGTTTTAGCCTTGTAGAAGTCCCGGAACCTCTTCAATTCAGGAAACTGTATA TTGCAAAACCTGTCCTTGAAGCCGATGTCATAATATCCCTCCCAAAACTGAAAACGCATGAGCTCACCTATTATACAGGC GCGGTTAAGAACTTCTTTGGCGCTCTTCCCCTCAGGTGCCGGAAAGAGACTCACCTCCTCGGGGAAAGAGACCTTTTTGG AGAGGCAGTTGCGGATTTATATTCTGTCATCCGGCCCGATTTTGCAGTAATGGATGGAATTGTGGGTATGGAAGGAAACG GGCCATCCCACGGGAAACCCATAAACTCAGGAGTAATTCTGGCAAGCAGGGACTGTGTTTCCCTGGATATTGTCGCGGCA GAGATGATAGGATTTGACCCTCTGAAAATCCCCACGACCGCGGGTGTCCTGAAGAAAGGCTTTGGAAACCAGTGCCCTGT TGTGGTCGGAACACCATTAAAAGAAGTCAAAAAGAAATTCAAGCCATCAAGCGGTGGAGTCAGTAAAGTTCCTCCTTTTC TGACGCGCCGCCTCGGAAAATATTATACCGCTTACCCGAGAATTAACCAGAGGAAATGCACCCGCTGCTCTGCGTGCTAC AATAACTGTTCTCCTCATGCTGTAGAGCGCCTTGCGGACGGGAGTTTCAGGATAAATAAGGATAAATGTATTTTATGTTA TTGCTGCCGTGAACTCTGCCCCAATAATGCGGTTGAGATTAAAAAATCGCTGCTGGCAACTCTTTTGACAGCAAGAGAAA GTATATTCCAGAAAACATGA
Upstream 100 bases:
>100_bases TTAAAAAAGGGAAAGCGGTTAAAAATAACATATGGATAAAAACTGACACCGCGAATGAAACCGGAAAAGAATTAATAATT ACCCTCATTTATTTAAAGCA
Downstream 100 bases:
>100_bases CCGGTAAAATGTAAAAAAGAAAAAAAGATAGAAAAAATTGAATTCAGGGAGATAGATAATGCCTCCCCGGATCCTTTATT ACTGATATTTCTTCTCCCTT
Product: Iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNKVSIVPCSDYSSAKEAIARALDLLGGLENVIGKGDSVLLKPNILAASPPEAAATTHPAVVAAMCEFVLSAGGKPVVGD GAGISRPGATAKALKTSGIEEAALRAGARVVNFETAGFSLVEVPEPLQFRKLYIAKPVLEADVIISLPKLKTHELTYYTG AVKNFFGALPLRCRKETHLLGERDLFGEAVADLYSVIRPDFAVMDGIVGMEGNGPSHGKPINSGVILASRDCVSLDIVAA EMIGFDPLKIPTTAGVLKKGFGNQCPVVVGTPLKEVKKKFKPSSGGVSKVPPFLTRRLGKYYTAYPRINQRKCTRCSACY NNCSPHAVERLADGSFRINKDKCILCYCCRELCPNNAVEIKKSLLATLLTARESIFQKT
Sequences:
>Translated_379_residues MNKVSIVPCSDYSSAKEAIARALDLLGGLENVIGKGDSVLLKPNILAASPPEAAATTHPAVVAAMCEFVLSAGGKPVVGD GAGISRPGATAKALKTSGIEEAALRAGARVVNFETAGFSLVEVPEPLQFRKLYIAKPVLEADVIISLPKLKTHELTYYTG AVKNFFGALPLRCRKETHLLGERDLFGEAVADLYSVIRPDFAVMDGIVGMEGNGPSHGKPINSGVILASRDCVSLDIVAA EMIGFDPLKIPTTAGVLKKGFGNQCPVVVGTPLKEVKKKFKPSSGGVSKVPPFLTRRLGKYYTAYPRINQRKCTRCSACY NNCSPHAVERLADGSFRINKDKCILCYCCRELCPNNAVEIKKSLLATLLTARESIFQKT >Mature_379_residues MNKVSIVPCSDYSSAKEAIARALDLLGGLENVIGKGDSVLLKPNILAASPPEAAATTHPAVVAAMCEFVLSAGGKPVVGD GAGISRPGATAKALKTSGIEEAALRAGARVVNFETAGFSLVEVPEPLQFRKLYIAKPVLEADVIISLPKLKTHELTYYTG AVKNFFGALPLRCRKETHLLGERDLFGEAVADLYSVIRPDFAVMDGIVGMEGNGPSHGKPINSGVILASRDCVSLDIVAA EMIGFDPLKIPTTAGVLKKGFGNQCPVVVGTPLKEVKKKFKPSSGGVSKVPPFLTRRLGKYYTAYPRINQRKCTRCSACY NNCSPHAVERLADGSFRINKDKCILCYCCRELCPNNAVEIKKSLLATLLTARESIFQKT
Specific function: Unknown
COG id: COG2006
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007160 [H]
Pfam domain/function: PF04015 DUF362 [H]
EC number: NA
Molecular weight: Translated: 40484; Mature: 40484
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVSIVPCSDYSSAKEAIARALDLLGGLENVIGKGDSVLLKPNILAASPPEAAATTHPA CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCCCCCCCCHH VVAAMCEFVLSAGGKPVVGDGAGISRPGATAKALKTSGIEEAALRAGARVVNFETAGFSL HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHCCCEEEEEECCCEEE VEVPEPLQFRKLYIAKPVLEADVIISLPKLKTHELTYYTGAVKNFFGALPLRCRKETHLL EECCCCHHHHHHHHHCCHHCCCCEEECCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHC GERDLFGEAVADLYSVIRPDFAVMDGIVGMEGNGPSHGKPINSGVILASRDCVSLDIVAA CCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH EMIGFDPLKIPTTAGVLKKGFGNQCPVVVGTPLKEVKKKFKPSSGGVSKVPPFLTRRLGK HHHCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHH YYTAYPRINQRKCTRCSACYNNCSPHAVERLADGSFRINKDKCILCYCCRELCPNNAVEI HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEHHHHHHHHCCCCHHHH KKSLLATLLTARESIFQKT HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKVSIVPCSDYSSAKEAIARALDLLGGLENVIGKGDSVLLKPNILAASPPEAAATTHPA CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCCCCCCCCHH VVAAMCEFVLSAGGKPVVGDGAGISRPGATAKALKTSGIEEAALRAGARVVNFETAGFSL HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHCCCEEEEEECCCEEE VEVPEPLQFRKLYIAKPVLEADVIISLPKLKTHELTYYTGAVKNFFGALPLRCRKETHLL EECCCCHHHHHHHHHCCHHCCCCEEECCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHC GERDLFGEAVADLYSVIRPDFAVMDGIVGMEGNGPSHGKPINSGVILASRDCVSLDIVAA CCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH EMIGFDPLKIPTTAGVLKKGFGNQCPVVVGTPLKEVKKKFKPSSGGVSKVPPFLTRRLGK HHHCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHH YYTAYPRINQRKCTRCSACYNNCSPHAVERLADGSFRINKDKCILCYCCRELCPNNAVEI HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEHHHHHHHHCCCCHHHH KKSLLATLLTARESIFQKT HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]