Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227894

Identifier: 21227894

GI number: 21227894

Start: 2140063

End: 2140266

Strand: Reverse

Name: 21227894

Synonym: MM_1792

Alternate gene names: NA

Gene position: 2140266-2140063 (Counterclockwise)

Preceding gene: 21227897

Following gene: 21227891

Centisome position: 52.25

GC content: 56.37

Gene sequence:

>204_bases
GTGGATACGGAGTATGCTCCGGAAAGATGCTCGCTATGCGATGGAACCGGGCATTCTGAAGGCGGAATCTGTGAGGCTTG
CGGAGGACAGGGGAACGTTCTCGTTGCCCAGCCTGCTATTACATGCCCGCTTTGTAACGGGTCAGGGAACCTTGAAACAG
GGACCTGCAAAGCCTGCGGAGGAAGCGGATGGGCTCTTTTCTGA

Upstream 100 bases:

>100_bases
CCTAGGACGCCGAAAATACGTAGTAAAAGAATCTTCTGTAAAACCAGATTACCCTGTGCTCATGAATAAAGAAGGTGTTG
GTTAGATGGTCTATACCTAC

Downstream 100 bases:

>100_bases
AAGAAAACAGGTAATGATTTCGAATAGCCTTTTTTGTTCCTTTTTTGTTCTCATTAATAATCCTGAATAAAACCTCATTT
CCGGGCAAAGGATCTGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MDTEYAPERCSLCDGTGHSEGGICEACGGQGNVLVAQPAITCPLCNGSGNLETGTCKACGGSGWALF

Sequences:

>Translated_67_residues
MDTEYAPERCSLCDGTGHSEGGICEACGGQGNVLVAQPAITCPLCNGSGNLETGTCKACGGSGWALF
>Mature_67_residues
MDTEYAPERCSLCDGTGHSEGGICEACGGQGNVLVAQPAITCPLCNGSGNLETGTCKACGGSGWALF

Specific function: Unknown

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6670; Mature: 6670

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
13.4 %Cys+Met (Translated Protein)
11.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
13.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTEYAPERCSLCDGTGHSEGGICEACGGQGNVLVAQPAITCPLCNGSGNLETGTCKACG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCEEECCC
GSGWALF
CCCEECC
>Mature Secondary Structure
MDTEYAPERCSLCDGTGHSEGGICEACGGQGNVLVAQPAITCPLCNGSGNLETGTCKACG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCEEECCC
GSGWALF
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA