Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227891

Identifier: 21227891

GI number: 21227891

Start: 2136998

End: 2137915

Strand: Reverse

Name: 21227891

Synonym: MM_1789

Alternate gene names: NA

Gene position: 2137915-2136998 (Counterclockwise)

Preceding gene: 21227894

Following gene: 21227885

Centisome position: 52.19

GC content: 44.12

Gene sequence:

>918_bases
GTGAACAGCACAGCAGTTGTGTTTACTACTTCGGATAACGAAGGCAATTTCAGGAAAACATATGAAAAGCCATTCAATGA
AACTGCTTTCAGAGACCTTATCAATCTTTTCGAAGAAAAGCGTTTCCTCCAGATGGAAGAACGCTATGTCCCTCAGGAAG
GCCAGCCTTTAGTTACGGATGTCGGGACTCTGGAAATTAGCCTGGAAGATGAAGTACATACAAAAACCGTAACTGTAGAC
CCTTATTATTCCGAATACATGCCAGAAGGCCTTCAGGAAATAGATTCCGCACTTGTTGAACTGAGAGCTTACGCCCTTTC
CACCTCTCGGGACGAAGCTGAAGAGATAGCCGAAGCCTGGATAGAGAACGCACCCACATACGGTTATGACGGTTTTGACC
TGAAACTGGAAGACCATGAAGTTCTTGAGACGTACCCTGAACAGCACTTTCTGAACTATGCATTTACCAGCAGGCACGGA
GGGTATGGAAACAGGACAGACCAGATCGTAACCGAAGCTCTCACCCCTCACAGTATGGAAATTACTGTTTCTGAAAGAGA
AGTAAGGTCTGCCGTAATAGATGGAGAATGGGATGAAATTGCCCAGAAGCCCCTTGAAAAAGAACCGCACAATGATGACA
GCACTGAAGTAGTTTCAGGAGCTGAAGAGGACCTTCTGGAGATGAAATATCCTGTATCCGAAGAAAAGACTCCATGGGAT
CAATGGTATGAAGAAGGGAACATCCAGTTTATTAAAGCCCCCAATGAGCCGGAATTGATAACAGCATATTACGGGACTGT
GTACGGAATAGAGGTCTTCGATATAATAAATGATGAGTCCTTTTACACAGGTAAAGTAAAAGAAAGCGACTCTGAACAGA
TGAGAGACCTTGGATGGACAGATTTGGAAGAAGAATAA

Upstream 100 bases:

>100_bases
TAACCCGGAGAATCAAACGGACGTATCAGAGAATGCTACCATAACCCACAAAACATACGGAGCCTTCACGCTCCCGGAAA
TGCAGCTGCAGGAGTTAACA

Downstream 100 bases:

>100_bases
ACCCTGAAAAAATATTAGAATAGAAGAGGCAAAAATTAAAAAAGATAAAAAAAGCACCTTTTTTATTAAGGTGCTTTACG
TTTATTTTTTTAAGGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNSTAVVFTTSDNEGNFRKTYEKPFNETAFRDLINLFEEKRFLQMEERYVPQEGQPLVTDVGTLEISLEDEVHTKTVTVD
PYYSEYMPEGLQEIDSALVELRAYALSTSRDEAEEIAEAWIENAPTYGYDGFDLKLEDHEVLETYPEQHFLNYAFTSRHG
GYGNRTDQIVTEALTPHSMEITVSEREVRSAVIDGEWDEIAQKPLEKEPHNDDSTEVVSGAEEDLLEMKYPVSEEKTPWD
QWYEEGNIQFIKAPNEPELITAYYGTVYGIEVFDIINDESFYTGKVKESDSEQMRDLGWTDLEEE

Sequences:

>Translated_305_residues
MNSTAVVFTTSDNEGNFRKTYEKPFNETAFRDLINLFEEKRFLQMEERYVPQEGQPLVTDVGTLEISLEDEVHTKTVTVD
PYYSEYMPEGLQEIDSALVELRAYALSTSRDEAEEIAEAWIENAPTYGYDGFDLKLEDHEVLETYPEQHFLNYAFTSRHG
GYGNRTDQIVTEALTPHSMEITVSEREVRSAVIDGEWDEIAQKPLEKEPHNDDSTEVVSGAEEDLLEMKYPVSEEKTPWD
QWYEEGNIQFIKAPNEPELITAYYGTVYGIEVFDIINDESFYTGKVKESDSEQMRDLGWTDLEEE
>Mature_305_residues
MNSTAVVFTTSDNEGNFRKTYEKPFNETAFRDLINLFEEKRFLQMEERYVPQEGQPLVTDVGTLEISLEDEVHTKTVTVD
PYYSEYMPEGLQEIDSALVELRAYALSTSRDEAEEIAEAWIENAPTYGYDGFDLKLEDHEVLETYPEQHFLNYAFTSRHG
GYGNRTDQIVTEALTPHSMEITVSEREVRSAVIDGEWDEIAQKPLEKEPHNDDSTEVVSGAEEDLLEMKYPVSEEKTPWD
QWYEEGNIQFIKAPNEPELITAYYGTVYGIEVFDIINDESFYTGKVKESDSEQMRDLGWTDLEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35238; Mature: 35238

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTAVVFTTSDNEGNFRKTYEKPFNETAFRDLINLFEEKRFLQMEERYVPQEGQPLVTD
CCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
VGTLEISLEDEVHTKTVTVDPYYSEYMPEGLQEIDSALVELRAYALSTSRDEAEEIAEAW
CEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IENAPTYGYDGFDLKLEDHEVLETYPEQHFLNYAFTSRHGGYGNRTDQIVTEALTPHSME
HHCCCCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEE
ITVSEREVRSAVIDGEWDEIAQKPLEKEPHNDDSTEVVSGAEEDLLEMKYPVSEEKTPWD
EEECHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCHH
QWYEEGNIQFIKAPNEPELITAYYGTVYGIEVFDIINDESFYTGKVKESDSEQMRDLGWT
HHHHCCCEEEEECCCCCCEEEEECCCEEEEEEEEEECCCCEEECCCCCCCHHHHHHCCCC
DLEEE
CCCCC
>Mature Secondary Structure
MNSTAVVFTTSDNEGNFRKTYEKPFNETAFRDLINLFEEKRFLQMEERYVPQEGQPLVTD
CCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
VGTLEISLEDEVHTKTVTVDPYYSEYMPEGLQEIDSALVELRAYALSTSRDEAEEIAEAW
CEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IENAPTYGYDGFDLKLEDHEVLETYPEQHFLNYAFTSRHGGYGNRTDQIVTEALTPHSME
HHCCCCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEE
ITVSEREVRSAVIDGEWDEIAQKPLEKEPHNDDSTEVVSGAEEDLLEMKYPVSEEKTPWD
EEECHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCHH
QWYEEGNIQFIKAPNEPELITAYYGTVYGIEVFDIINDESFYTGKVKESDSEQMRDLGWT
HHHHCCCEEEEECCCCCCEEEEECCCEEEEEEEEEECCCCEEECCCCCCCHHHHHHCCCC
DLEEE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA