| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227885
Identifier: 21227885
GI number: 21227885
Start: 2130124
End: 2130309
Strand: Reverse
Name: 21227885
Synonym: MM_1783
Alternate gene names: NA
Gene position: 2130309-2130124 (Counterclockwise)
Preceding gene: 21227891
Following gene: 21227882
Centisome position: 52.01
GC content: 44.62
Gene sequence:
>186_bases ATGGGTTATCCTGCAACCAGGGACGACCTTGTGAAGTTCGCAGAAGGGAAACAGGCAGAGAGTGATGTACTGGATCTTCT AAAAGGAATATCTGAAATAGAGTATAATACTCCTGATGATGTTGCCAGAGAAATCGAACGCCTGGAAAGCGAACGTGCCA GAGCACCAAAACCAAAAGAGCAATAA
Upstream 100 bases:
>100_bases AGAAATAACCAGATTGGAATAGTAAACTACCTGAACCTGTGGAGGTGAACTTATTAAAAGTAGTCCACGCGATGTCAAAG AATTTATAACCGGCAGAGGA
Downstream 100 bases:
>100_bases CCTCCCAACTTTAGTCCGATTAAGGGTAAGTAATGCCCACATGCTTATCCCCGTAAAAAGGAAGAAAGGATTTATTCTTT GCTCCAGAGATATGAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MGYPATRDDLVKFAEGKQAESDVLDLLKGISEIEYNTPDDVAREIERLESERARAPKPKEQ
Sequences:
>Translated_61_residues MGYPATRDDLVKFAEGKQAESDVLDLLKGISEIEYNTPDDVAREIERLESERARAPKPKEQ >Mature_60_residues GYPATRDDLVKFAEGKQAESDVLDLLKGISEIEYNTPDDVAREIERLESERARAPKPKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6920; Mature: 6789
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYPATRDDLVKFAEGKQAESDVLDLLKGISEIEYNTPDDVAREIERLESERARAPKPKE CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC Q C >Mature Secondary Structure GYPATRDDLVKFAEGKQAESDVLDLLKGISEIEYNTPDDVAREIERLESERARAPKPKE CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA