| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227877
Identifier: 21227877
GI number: 21227877
Start: 2118302
End: 2119312
Strand: Direct
Name: 21227877
Synonym: MM_1775
Alternate gene names: NA
Gene position: 2118302-2119312 (Clockwise)
Preceding gene: 21227875
Following gene: 21227879
Centisome position: 51.71
GC content: 45.2
Gene sequence:
>1011_bases ATGAGAAGGCAGTGTATAAAAGTCCCCCGAAAGAAAGGAGAACCTGCAAGAAGGATACTCCTTGGTCTTGAAATTCTTGA TAATTCTTTGAAGATCGGTTCGGATGAAACCTTCCTTTATCTCCCACTTTCCAGAGAGCCTGATACCGGGAAACTGGAAG GGCTGCCTGAAGGTTCTGAACTTACATTCTTTGATTTCGAGCCCCTGGAAAAAAAGCCTGTCCCTGAAGACATCCTCGGT TTCACTCCCGCCTATGAAGTCATAGGAGACATTGCCCTCCTGGAAGACGAGAAACTGGATGCAAAAACCGCTCTAAAGAT CGCAGATGCCCTCCTGAAAACTCAGCCGAATATAAAATCCGTTGTCAAGCCTCTTACTCCTGTTATCGGGGAATTCAGGG TAAGGGAATTTGAGGTAATTGCAGGCGAGCACAGGACCGAAACAATCCACAGGGAGTATGGCTGCCGTTATAAAGTAGAC CTTTCAAGGGCTTATTTTACTCCTCGCCTTTCTACGGAACGTTCAAGAATTCTCTCCTGGATTAAGGAAGGGGATACTGT TGTCGATATGTTTGCCGGGGTTGGCCCCTACAGTATCCTGCTTGCAAAAAGCAAAAAGCCTTCCAGGGTTGTGGCAATAG ACAAAAACCCTGAAGCAGTACGCTATCTGAATGAAAATATTTCGCTCAATTCGGCAAAAAATATTGAAGCAATCGAAGGT GATGCCAGAGAAGAGGCAAAAAGGTTTGCAGGAACTGCTGATCATGTAATCATGAACCTGCCCCATAATGCTTATGAATT CCTTGATTCTGCTGTCCTTCTTACAAAGCAGGGAGGAATAATCCACTACTACGGAATAACCCCTGAAGACGACCTCTTTG AAAGTTCTATTGAACTTATCCGGAAAGCTGCGGAAAAAGCAGGAAGAAAGGTCGAGGTTCTCGAGAAAAGGGTAGTCCGT TCATATGCTCCTCACCAGTATAACATCTGCATCGAGGCGAAGATTCTTTGA
Upstream 100 bases:
>100_bases TTTTCCTATATCAGGAAAACCTTGTCCATCAGTGAAACTGAAAATTGGGATAGTTTAATAATACAAGGATAACCTTAGGT TTCCGAAAGGTCGATTTTTC
Downstream 100 bases:
>100_bases AATCTATGCCGCTGCCAGTTTCTTTGAAGTTTGGAGTTTCAACCCCCTGCGCGCTGGCACCTGATTGCGTAAGGGATCAG ATTTCAGTAAAAATTCCTTT
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRRQCIKVPRKKGEPARRILLGLEILDNSLKIGSDETFLYLPLSREPDTGKLEGLPEGSELTFFDFEPLEKKPVPEDILG FTPAYEVIGDIALLEDEKLDAKTALKIADALLKTQPNIKSVVKPLTPVIGEFRVREFEVIAGEHRTETIHREYGCRYKVD LSRAYFTPRLSTERSRILSWIKEGDTVVDMFAGVGPYSILLAKSKKPSRVVAIDKNPEAVRYLNENISLNSAKNIEAIEG DAREEAKRFAGTADHVIMNLPHNAYEFLDSAVLLTKQGGIIHYYGITPEDDLFESSIELIRKAAEKAGRKVEVLEKRVVR SYAPHQYNICIEAKIL
Sequences:
>Translated_336_residues MRRQCIKVPRKKGEPARRILLGLEILDNSLKIGSDETFLYLPLSREPDTGKLEGLPEGSELTFFDFEPLEKKPVPEDILG FTPAYEVIGDIALLEDEKLDAKTALKIADALLKTQPNIKSVVKPLTPVIGEFRVREFEVIAGEHRTETIHREYGCRYKVD LSRAYFTPRLSTERSRILSWIKEGDTVVDMFAGVGPYSILLAKSKKPSRVVAIDKNPEAVRYLNENISLNSAKNIEAIEG DAREEAKRFAGTADHVIMNLPHNAYEFLDSAVLLTKQGGIIHYYGITPEDDLFESSIELIRKAAEKAGRKVEVLEKRVVR SYAPHQYNICIEAKIL >Mature_336_residues MRRQCIKVPRKKGEPARRILLGLEILDNSLKIGSDETFLYLPLSREPDTGKLEGLPEGSELTFFDFEPLEKKPVPEDILG FTPAYEVIGDIALLEDEKLDAKTALKIADALLKTQPNIKSVVKPLTPVIGEFRVREFEVIAGEHRTETIHREYGCRYKVD LSRAYFTPRLSTERSRILSWIKEGDTVVDMFAGVGPYSILLAKSKKPSRVVAIDKNPEAVRYLNENISLNSAKNIEAIEG DAREEAKRFAGTADHVIMNLPHNAYEFLDSAVLLTKQGGIIHYYGITPEDDLFESSIELIRKAAEKAGRKVEVLEKRVVR SYAPHQYNICIEAKIL
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1557 and to yeast YHR070w [H]
Homologues:
Organism=Homo sapiens, GI145275187, Length=303, Percent_Identity=32.3432343234323, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI193207541, Length=188, Percent_Identity=32.9787234042553, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI193207539, Length=188, Percent_Identity=32.9787234042553, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI193207537, Length=188, Percent_Identity=32.9787234042553, Blast_Score=92, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321861, Length=191, Percent_Identity=32.4607329842932, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI45551508, Length=217, Percent_Identity=35.0230414746544, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003402 [H]
Pfam domain/function: PF02475 Met_10 [H]
EC number: NA
Molecular weight: Translated: 37881; Mature: 37881
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQCIKVPRKKGEPARRILLGLEILDNSLKIGSDETFLYLPLSREPDTGKLEGLPEGSE CCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE LTFFDFEPLEKKPVPEDILGFTPAYEVIGDIALLEDEKLDAKTALKIADALLKTQPNIKS EEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCHHH VVKPLTPVIGEFRVREFEVIAGEHRTETIHREYGCRYKVDLSRAYFTPRLSTERSRILSW HHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCEEEEECHHHEECCCCCHHHHHHHHH IKEGDTVVDMFAGVGPYSILLAKSKKPSRVVAIDKNPEAVRYLNENISLNSAKNIEAIEG HHCCCHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHCC DAREEAKRFAGTADHVIMNLPHNAYEFLDSAVLLTKQGGIIHYYGITPEDDLFESSIELI CHHHHHHHHCCCCCCEEEECCCHHHHHHHHHEEEEECCCEEEEECCCCCHHHHHHHHHHH RKAAEKAGRKVEVLEKRVVRSYAPHQYNICIEAKIL HHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEC >Mature Secondary Structure MRRQCIKVPRKKGEPARRILLGLEILDNSLKIGSDETFLYLPLSREPDTGKLEGLPEGSE CCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE LTFFDFEPLEKKPVPEDILGFTPAYEVIGDIALLEDEKLDAKTALKIADALLKTQPNIKS EEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCHHH VVKPLTPVIGEFRVREFEVIAGEHRTETIHREYGCRYKVDLSRAYFTPRLSTERSRILSW HHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCEEEEECHHHEECCCCCHHHHHHHHH IKEGDTVVDMFAGVGPYSILLAKSKKPSRVVAIDKNPEAVRYLNENISLNSAKNIEAIEG HHCCCHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHCC DAREEAKRFAGTADHVIMNLPHNAYEFLDSAVLLTKQGGIIHYYGITPEDDLFESSIELI CHHHHHHHHCCCCCCEEEECCCHHHHHHHHHEEEEECCCEEEEECCCCCHHHHHHHHHHH RKAAEKAGRKVEVLEKRVVRSYAPHQYNICIEAKIL HHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]