| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227875
Identifier: 21227875
GI number: 21227875
Start: 2117165
End: 2117818
Strand: Direct
Name: 21227875
Synonym: MM_1773
Alternate gene names: NA
Gene position: 2117165-2117818 (Clockwise)
Preceding gene: 21227874
Following gene: 21227877
Centisome position: 51.68
GC content: 47.4
Gene sequence:
>654_bases ATGCTTACACTTGAGATCTTCAGAGCCCTTCTCCTGGGCTTCACCATCGGGCTTACTGGCGCCCTGGTCCCCGGGCCCAT GCTTTTTGCAACCATAGAGCTTTCACTCAAAAAAGGGTGGCTTGCAGGGCCGGAGGTCGTTTTCGGGCACATTCTGGTTG AGCTTGTACTTTCTATTCTGATTCTCTTTGGGGTTGCTTCTTTTATCGGAAGTGGAGCGATTTCAGCTGTTTCCATCATT GGAGGTTTTTCCCTTACGGTTTTCGGACTGCTTACGGTAAAAGATGCAAAAACTACTGCTTCTGCAGGACTTTCTCCGGA GACGTCTGGCCTGAAATTGACTTCAAATCCCGTAGCTTTGGGCCTGATAACCTCAGTTTCCAATCCTTACTTCTGGATCT GGTGGCTAACTGCTGGAAGTGCGCTTGTACTTAAGGCATATGAACTGGGGATTATCATCTCAATAGCCTATATCCTGGGG CACTGGACCGCAGACCTCAGCTGGTTTACTGCAATATCCGGGTCTTTCAGCCGTGGAAAAACCCTGTTTTCTCAACAAAC ACACAGGTACATCCTCTACGCGTGCGGAACGTTTCTAATATTTTTTGGGCTTTATTTCATGTTTAACTATAAAGGCGCAG CTCAACTGTTCTAA
Upstream 100 bases:
>100_bases CAAAACAGCTTTACAAAACAGAGTTATAAAAAACGCATGGTTCTGATAATCAAAATATTTTTATAAAAACTACGTAAATT TATATTAACCATGGGTTATA
Downstream 100 bases:
>100_bases TAATATTTTTTCTAACAGGGATTCTTTATTGTTGTATATCTTTTAAAATTTTTTCCCTTTTACTCAGCACTGAAAACAGA TAGACTCCCCCACTGAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine Exporter Protein LysE/YggA; Amino Acid Transporter LysE; Transporter Protein; LysE Family Translocator Protein; Threonine Efflux Protein
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLTLEIFRALLLGFTIGLTGALVPGPMLFATIELSLKKGWLAGPEVVFGHILVELVLSILILFGVASFIGSGAISAVSII GGFSLTVFGLLTVKDAKTTASAGLSPETSGLKLTSNPVALGLITSVSNPYFWIWWLTAGSALVLKAYELGIIISIAYILG HWTADLSWFTAISGSFSRGKTLFSQQTHRYILYACGTFLIFFGLYFMFNYKGAAQLF
Sequences:
>Translated_217_residues MLTLEIFRALLLGFTIGLTGALVPGPMLFATIELSLKKGWLAGPEVVFGHILVELVLSILILFGVASFIGSGAISAVSII GGFSLTVFGLLTVKDAKTTASAGLSPETSGLKLTSNPVALGLITSVSNPYFWIWWLTAGSALVLKAYELGIIISIAYILG HWTADLSWFTAISGSFSRGKTLFSQQTHRYILYACGTFLIFFGLYFMFNYKGAAQLF >Mature_217_residues MLTLEIFRALLLGFTIGLTGALVPGPMLFATIELSLKKGWLAGPEVVFGHILVELVLSILILFGVASFIGSGAISAVSII GGFSLTVFGLLTVKDAKTTASAGLSPETSGLKLTSNPVALGLITSVSNPYFWIWWLTAGSALVLKAYELGIIISIAYILG HWTADLSWFTAISGSFSRGKTLFSQQTHRYILYACGTFLIFFGLYFMFNYKGAAQLF
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23308; Mature: 23308
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLEIFRALLLGFTIGLTGALVPGPMLFATIELSLKKGWLAGPEVVFGHILVELVLSIL CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH ILFGVASFIGSGAISAVSIIGGFSLTVFGLLTVKDAKTTASAGLSPETSGLKLTSNPVAL HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEEECCCCHHHHCCCCCCCCCEEEECCCEEE GLITSVSNPYFWIWWLTAGSALVLKAYELGIIISIAYILGHWTADLSWFTAISGSFSRGK EEEECCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TLFSQQTHRYILYACGTFLIFFGLYFMFNYKGAAQLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MLTLEIFRALLLGFTIGLTGALVPGPMLFATIELSLKKGWLAGPEVVFGHILVELVLSIL CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH ILFGVASFIGSGAISAVSIIGGFSLTVFGLLTVKDAKTTASAGLSPETSGLKLTSNPVAL HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEEECCCCHHHHCCCCCCCCCEEEECCCEEE GLITSVSNPYFWIWWLTAGSALVLKAYELGIIISIAYILGHWTADLSWFTAISGSFSRGK EEEECCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TLFSQQTHRYILYACGTFLIFFGLYFMFNYKGAAQLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA