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The map label for this gene is pdtaS [H]

Identifier: 21227879

GI number: 21227879

Start: 2120683

End: 2122620

Strand: Direct

Name: pdtaS [H]

Synonym: MM_1777

Alternate gene names: 21227879

Gene position: 2120683-2122620 (Clockwise)

Preceding gene: 21227877

Following gene: 21227883

Centisome position: 51.77

GC content: 40.35

Gene sequence:

>1938_bases
GTGGTTAGTCTTAGCAATAATCTTCTTTTCCATACACTTATAGAGTTATTCAGCGTCATAATCGCATATATTATATTTCT
GGTTGTCTGGGAATCAAAAACATTTCTTGAAAACAGGTATCTACTGTTAATAGGAATCTCCTATTTCTTTATCGGGACTC
TTGACCTTTTGCATGCTTTATCCTATGAAAGGATGGGGTTCTTTTCATGGTCCGGCATGAATCTTCCTGCCCAGCTATGG
ATCGCTTCAAGGTATCTGGAGAGCGTATCGTTTCTGATTGCTCCTCTATTATTGTCGAATTCCAGGCTATTGAACTTAAA
AACAGATATCAGTCCTGTAGAAAAAGCAAGGTTTGCCTGGGAATTATTTATCGTATATTCCGGAATTACTTTTGTTTTGT
TTCTTTCAATCTTTGTTTTAAGGAACTTTCCGGACTCCTATATCGAAGGCAGAGGGCTGACTGATTTTTTAATTATAAGT
GAATATGTAATCTCTCTAATTCTGGTCTGCTCATTAGTTCTTCTTTATTTAAAGAGGGACAGATTTGAAAACCATGTTTT
CAGACTGCTCACAGCGTCCATAGTCCTGACAATTATTTCAGAAATAATCTTTGCCAGGTTTACATATGTGGATGATTTTT
CGTTTGTTACCGGGCACTATTTTAAACTACTGTCTTTCTACTTTGTTTACAGGGCAGTAGTGTCAACAGGATTCAGCGAA
CCCTGCAGTATTCTTTTCAGGGAACTTAAACAGAATGAAGAGGCTTTGAGGAGGAAGACATTTTTTCTTCAGGACGATCA
GGGGCGAATTTACAGGATGCTAGGCGTTCAAACGGAAGAGTCGGAAGATGCCTTTTCTACCTGTAACGCCAGAATTAATG
AAAAAACTTATTCTTCCCTGGTGAAGGATATCGAAGGACTGATCGGTTTCCGTTTTGATGATAGTAAGGGTACGGTTTTC
ATAGATGGGGACGTTGAAGAGATTACGGGGTACAGTACAGAAGATTTTCTTTCTCACAGGGTCAAATGGGCAGATCTGGT
CTTACCTGAAGACCAGTATCTTATTTTTGAGAGAATAAACAGGTCTGTTTCCAATCCCGATCATTCTATTGAAACCGAGT
ACAGGATAAAGAGAAAAAATGGAGAAATAAGGTGGATAAGGGAGTTTCTTCAGAAATTTCCGGAAGAATCCAAAAATTCC
AGGCAATTCCAGGGATTTATTCACGATATTACCGGACGTAAAAAGGCAGAGGCAGCTCTTCAAAAAATCGAGGAAGTCCG
CATAAAGGAAATCCACCACAGAATCAAGAATAATTTGCAGGTAATCTCGTCCCTTCTCAGCCTCGAAGCTGAAAAGTTCA
GTGACAGAAAAATGCTTGAATCCTTCCGTGAGAGCCAGAACCGTGTAGCTTCAATGGCTTTGATTCATGAAGAATTATAC
AAAGGCAGCGATATGGACACTCTCGATTTTTCCGCCTATCTCAGGAAACTGACTGCAGATCTTCTAGCTTCATATCGTGT
GGGCAATGATAAAATAACTCTCAGGCTTGACCTTGAACAGGCCCATTTTGATATGGATACCTCAATCCCTCTGGGAATTA
TCGTCAATGAACTGGTCTCAAACTCCCTGAAGCATGCTTTTCCAGAAGGAAAGGGAGGCGAAATTTACATAGGTCTTCAC
AGGACGGAAAAAATAGCCTTAAAAGCAGGAATCTCCGGTGAGAGTGTCGATTGTGAAAGTGGATTTGATTACACCTTAAC
TGTGGCAGACAACGGAAAGGGTGTTCCGGAAGAAACTGATTTTGAAAATGCAGATTCCCTCGGTCTTCAACTCGTAAATC
TCCTCGTTGAACAGATAGATGGCTGTGTTAAACTTGAAAGGCGTCAGGGAACCAGGTTCATTCTGGGCATAAATGTAAAA
AACGGGGTCAAAACCTGA

Upstream 100 bases:

>100_bases
CTATTGATACGGGATAAATGTGTCTGGAAGAGAGCTAAAAAACAACCGGAATATAATCTTCAGGATAATCTACTGGGCAG
TTATAATAGGTTTACTGCAT

Downstream 100 bases:

>100_bases
TGCTGTTTTGTATTCAAAAAAATGACTTATAATCTCAAAAGGAAATCTCATTTCAGGAAAATTCCTGTGTTTAATTTTTT
CTTCCATATCCCGGTTCGTG

Product: sensory transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MVSLSNNLLFHTLIELFSVIIAYIIFLVVWESKTFLENRYLLLIGISYFFIGTLDLLHALSYERMGFFSWSGMNLPAQLW
IASRYLESVSFLIAPLLLSNSRLLNLKTDISPVEKARFAWELFIVYSGITFVLFLSIFVLRNFPDSYIEGRGLTDFLIIS
EYVISLILVCSLVLLYLKRDRFENHVFRLLTASIVLTIISEIIFARFTYVDDFSFVTGHYFKLLSFYFVYRAVVSTGFSE
PCSILFRELKQNEEALRRKTFFLQDDQGRIYRMLGVQTEESEDAFSTCNARINEKTYSSLVKDIEGLIGFRFDDSKGTVF
IDGDVEEITGYSTEDFLSHRVKWADLVLPEDQYLIFERINRSVSNPDHSIETEYRIKRKNGEIRWIREFLQKFPEESKNS
RQFQGFIHDITGRKKAEAALQKIEEVRIKEIHHRIKNNLQVISSLLSLEAEKFSDRKMLESFRESQNRVASMALIHEELY
KGSDMDTLDFSAYLRKLTADLLASYRVGNDKITLRLDLEQAHFDMDTSIPLGIIVNELVSNSLKHAFPEGKGGEIYIGLH
RTEKIALKAGISGESVDCESGFDYTLTVADNGKGVPEETDFENADSLGLQLVNLLVEQIDGCVKLERRQGTRFILGINVK
NGVKT

Sequences:

>Translated_645_residues
MVSLSNNLLFHTLIELFSVIIAYIIFLVVWESKTFLENRYLLLIGISYFFIGTLDLLHALSYERMGFFSWSGMNLPAQLW
IASRYLESVSFLIAPLLLSNSRLLNLKTDISPVEKARFAWELFIVYSGITFVLFLSIFVLRNFPDSYIEGRGLTDFLIIS
EYVISLILVCSLVLLYLKRDRFENHVFRLLTASIVLTIISEIIFARFTYVDDFSFVTGHYFKLLSFYFVYRAVVSTGFSE
PCSILFRELKQNEEALRRKTFFLQDDQGRIYRMLGVQTEESEDAFSTCNARINEKTYSSLVKDIEGLIGFRFDDSKGTVF
IDGDVEEITGYSTEDFLSHRVKWADLVLPEDQYLIFERINRSVSNPDHSIETEYRIKRKNGEIRWIREFLQKFPEESKNS
RQFQGFIHDITGRKKAEAALQKIEEVRIKEIHHRIKNNLQVISSLLSLEAEKFSDRKMLESFRESQNRVASMALIHEELY
KGSDMDTLDFSAYLRKLTADLLASYRVGNDKITLRLDLEQAHFDMDTSIPLGIIVNELVSNSLKHAFPEGKGGEIYIGLH
RTEKIALKAGISGESVDCESGFDYTLTVADNGKGVPEETDFENADSLGLQLVNLLVEQIDGCVKLERRQGTRFILGINVK
NGVKT
>Mature_645_residues
MVSLSNNLLFHTLIELFSVIIAYIIFLVVWESKTFLENRYLLLIGISYFFIGTLDLLHALSYERMGFFSWSGMNLPAQLW
IASRYLESVSFLIAPLLLSNSRLLNLKTDISPVEKARFAWELFIVYSGITFVLFLSIFVLRNFPDSYIEGRGLTDFLIIS
EYVISLILVCSLVLLYLKRDRFENHVFRLLTASIVLTIISEIIFARFTYVDDFSFVTGHYFKLLSFYFVYRAVVSTGFSE
PCSILFRELKQNEEALRRKTFFLQDDQGRIYRMLGVQTEESEDAFSTCNARINEKTYSSLVKDIEGLIGFRFDDSKGTVF
IDGDVEEITGYSTEDFLSHRVKWADLVLPEDQYLIFERINRSVSNPDHSIETEYRIKRKNGEIRWIREFLQKFPEESKNS
RQFQGFIHDITGRKKAEAALQKIEEVRIKEIHHRIKNNLQVISSLLSLEAEKFSDRKMLESFRESQNRVASMALIHEELY
KGSDMDTLDFSAYLRKLTADLLASYRVGNDKITLRLDLEQAHFDMDTSIPLGIIVNELVSNSLKHAFPEGKGGEIYIGLH
RTEKIALKAGISGESVDCESGFDYTLTVADNGKGVPEETDFENADSLGLQLVNLLVEQIDGCVKLERRQGTRFILGINVK
NGVKT

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 74194; Mature: 74194

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLSNNLLFHTLIELFSVIIAYIIFLVVWESKTFLENRYLLLIGISYFFIGTLDLLHAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEHHHHHHHHHHHHHHHH
SYERMGFFSWSGMNLPAQLWIASRYLESVSFLIAPLLLSNSRLLNLKTDISPVEKARFAW
HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
ELFIVYSGITFVLFLSIFVLRNFPDSYIEGRGLTDFLIISEYVISLILVCSLVLLYLKRD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFENHVFRLLTASIVLTIISEIIFARFTYVDDFSFVTGHYFKLLSFYFVYRAVVSTGFSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PCSILFRELKQNEEALRRKTFFLQDDQGRIYRMLGVQTEESEDAFSTCNARINEKTYSSL
HHHHHHHHHHCCHHHHHHHHCEEECCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHHHHH
VKDIEGLIGFRFDDSKGTVFIDGDVEEITGYSTEDFLSHRVKWADLVLPEDQYLIFERIN
HHHHHHHHEEEEECCCCEEEECCCHHHHCCCCHHHHHHHCCHHHHEECCCCCHHHHHHHH
RSVSNPDHSIETEYRIKRKNGEIRWIREFLQKFPEESKNSRQFQGFIHDITGRKKAEAAL
HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH
QKIEEVRIKEIHHRIKNNLQVISSLLSLEAEKFSDRKMLESFRESQNRVASMALIHEELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGSDMDTLDFSAYLRKLTADLLASYRVGNDKITLRLDLEQAHFDMDTSIPLGIIVNELVS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHHHHHH
NSLKHAFPEGKGGEIYIGLHRTEKIALKAGISGESVDCESGFDYTLTVADNGKGVPEETD
HHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
FENADSLGLQLVNLLVEQIDGCVKLERRQGTRFILGINVKNGVKT
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MVSLSNNLLFHTLIELFSVIIAYIIFLVVWESKTFLENRYLLLIGISYFFIGTLDLLHAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEHHHHHHHHHHHHHHHH
SYERMGFFSWSGMNLPAQLWIASRYLESVSFLIAPLLLSNSRLLNLKTDISPVEKARFAW
HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
ELFIVYSGITFVLFLSIFVLRNFPDSYIEGRGLTDFLIISEYVISLILVCSLVLLYLKRD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFENHVFRLLTASIVLTIISEIIFARFTYVDDFSFVTGHYFKLLSFYFVYRAVVSTGFSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PCSILFRELKQNEEALRRKTFFLQDDQGRIYRMLGVQTEESEDAFSTCNARINEKTYSSL
HHHHHHHHHHCCHHHHHHHHCEEECCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHHHHH
VKDIEGLIGFRFDDSKGTVFIDGDVEEITGYSTEDFLSHRVKWADLVLPEDQYLIFERIN
HHHHHHHHEEEEECCCCEEEECCCHHHHCCCCHHHHHHHCCHHHHEECCCCCHHHHHHHH
RSVSNPDHSIETEYRIKRKNGEIRWIREFLQKFPEESKNSRQFQGFIHDITGRKKAEAAL
HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH
QKIEEVRIKEIHHRIKNNLQVISSLLSLEAEKFSDRKMLESFRESQNRVASMALIHEELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGSDMDTLDFSAYLRKLTADLLASYRVGNDKITLRLDLEQAHFDMDTSIPLGIIVNELVS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHHHHHH
NSLKHAFPEGKGGEIYIGLHRTEKIALKAGISGESVDCESGFDYTLTVADNGKGVPEETD
HHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
FENADSLGLQLVNLLVEQIDGCVKLERRQGTRFILGINVKNGVKT
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]