| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227733
Identifier: 21227733
GI number: 21227733
Start: 1945708
End: 1946331
Strand: Direct
Name: 21227733
Synonym: MM_1631
Alternate gene names: NA
Gene position: 1945708-1946331 (Clockwise)
Preceding gene: 21227732
Following gene: 21227734
Centisome position: 47.5
GC content: 46.47
Gene sequence:
>624_bases TTGAATGGGGGTTCTAGCATTAAAGTTCTTGGATTGGTGGGTAGTCCTAAAGTCGATGGAAACACCGCGAAAATGGTTGA TGCAATTCTGGAAGGAGCTGCAGAAAATGGGGCAGAAACCGTAATTTATAATCTTGCTTCTCTTGACATCAAAGGGTGTG ATGCCTGCCACAGGTGCCAGGAGACTGGCTGCTGTGCTATAGATGATGATATGCAGGAGCTTTACCGGCAAATAGAGGAA GCAGACGCCGTTGTACTCGGCTCTCCTGTATATATGTGGCAGATGACAGCCCAGACAAAACTCCTTATTGACCGCATGAC AGCGTTTTTAAAGCCGAATTTCTCCAGCAGGCTCGACCATAAAAAATTAATTCTGGTTTTTACTCAGGGAATTCCGGACA GGGATGCCTTCAATTCGTATTTCGAATATACAGCAGGTGTACTTTATTATCTGGGATTTGATGTTCTGGAGACAATTGTA GCAGCAGGCACTGATAACCTTGAAGTAGCTTTCAGGCCCAGGCTGCTGGAAAAATCCCGAGAACTCGGAAAACTGATCTC GGCTTCAAACCCTGTAAGCCCGAGGTACAGAAGAGCCGAACCGCGCCCTACACCATCTATCTGA
Upstream 100 bases:
>100_bases CATACATACTGGCTTATTTTTTTAAATAAGAGAAACGTTTTTATCCTGATTCATCGTTTATACTTTTGTGTAAAAATGTT TAGTATCAGATATTTAAAAT
Downstream 100 bases:
>100_bases TTTTTCCATTTCTTCATCTCTTTCTTTTTTTATATTAACGGCTGGTAGAAAAAAGATCTTCTGGGGAAACATTTTATACC TCTGTCCTTCCATCTTCTTA
Product: iron-sulfur flavoprotein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQETGCCAIDDDMQELYRQIEE ADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDHKKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIV AAGTDNLEVAFRPRLLEKSRELGKLISASNPVSPRYRRAEPRPTPSI
Sequences:
>Translated_207_residues MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQETGCCAIDDDMQELYRQIEE ADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDHKKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIV AAGTDNLEVAFRPRLLEKSRELGKLISASNPVSPRYRRAEPRPTPSI >Mature_207_residues MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQETGCCAIDDDMQELYRQIEE ADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDHKKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIV AAGTDNLEVAFRPRLLEKSRELGKLISASNPVSPRYRRAEPRPTPSI
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 22788; Mature: 22788
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQ CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHHHH ETGCCAIDDDMQELYRQIEEADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDH HCCCEEECHHHHHHHHHHHHCCEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHCCC KKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIVAAGTDNLEVAFRPRLLEKSR CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH ELGKLISASNPVSPRYRRAEPRPTPSI HHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQ CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHHHH ETGCCAIDDDMQELYRQIEEADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDH HCCCEEECHHHHHHHHHHHHCCEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHCCC KKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIVAAGTDNLEVAFRPRLLEKSR CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH ELGKLISASNPVSPRYRRAEPRPTPSI HHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]