Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227734

Identifier: 21227734

GI number: 21227734

Start: 1946470

End: 1947036

Strand: Direct

Name: 21227734

Synonym: MM_1632

Alternate gene names: NA

Gene position: 1946470-1947036 (Clockwise)

Preceding gene: 21227733

Following gene: 21227735

Centisome position: 47.52

GC content: 44.97

Gene sequence:

>567_bases
ATGAAAGTTTTAGGATTGATCGGAAGCCCCAGAAAGGATGGAAACACTGAAAAGCTCGTGAATGCTATTCTTGACGGTGC
CGCCGAAAAAGGTGCTGAGATAAAAATCTACCATCTTGCCAGAATGGATCTAAAACCCTGTAAAGGCTGCATGTCCTGCA
AGCTCGAGGGGAAATGCATTATTGATGACGATATGCAGGAGCTCTATAAAGAAATTCTATCCGCGGATGCCATTGTACTC
GGTTCTCCTATCTATATGTGGGAAATCACAGCCCTTACAAAAACAATTGTTGACCGCCTGATAGCTTTAACCTGCTGGCA
GCCCTGTGCAAAGCCTGAATATCCAAACCTGCTGAGAATAAAGACCAGGCTGGTCCTTGCTTATACATATGGGAACCCGG
ACCCCAACAACTTCAACCAGTATTTCAAATATATGGAAGGGCTTTTCAGCTTTTTAGGCTTTGATGTCCAGGGAAGCATC
TGGGTTTCGGGCACAATAGGCCCCGATGATATCCTGCACCAGAGTGAAATATTCGAAGAAGCAAGAGCTCTCGGGAAAAA
ACTCTAA

Upstream 100 bases:

>100_bases
CGGCTGGTAGAAAAAAGATCTTCTGGGGAAACATTTTATACCTCTGTCCTTCCATCTTCTTATTACTCTTTATTTTCCTT
TTTCGGAGGAATGCACTCAG

Downstream 100 bases:

>100_bases
ATTTATCGGAAAAAAGACATAACCTGCAACTTTTCCCCGAATTCGACTACCGGAGATAGTTCAGGGACAAATTTCAAGTT
TTTTCTGAATTTTTCAATCA

Product: iron-sulfur flavoprotein

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCIIDDDMQELYKEILSADAIVL
GSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRIKTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSI
WVSGTIGPDDILHQSEIFEEARALGKKL

Sequences:

>Translated_188_residues
MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCIIDDDMQELYKEILSADAIVL
GSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRIKTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSI
WVSGTIGPDDILHQSEIFEEARALGKKL
>Mature_188_residues
MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCIIDDDMQELYKEILSADAIVL
GSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRIKTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSI
WVSGTIGPDDILHQSEIFEEARALGKKL

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 21070; Mature: 21070

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCI
CCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHCCHHHCCCCCCEEE
IDDDMQELYKEILSADAIVLGSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRI
ECHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
KTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSIWVSGTIGPDDILHQSEIFEE
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
ARALGKKL
HHHHHCCC
>Mature Secondary Structure
MKVLGLIGSPRKDGNTEKLVNAILDGAAEKGAEIKIYHLARMDLKPCKGCMSCKLEGKCI
CCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHCCHHHCCCCCCEEE
IDDDMQELYKEILSADAIVLGSPIYMWEITALTKTIVDRLIALTCWQPCAKPEYPNLLRI
ECHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
KTRLVLAYTYGNPDPNNFNQYFKYMEGLFSFLGFDVQGSIWVSGTIGPDDILHQSEIFEE
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
ARALGKKL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]