Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227732

Identifier: 21227732

GI number: 21227732

Start: 1944780

End: 1945511

Strand: Direct

Name: 21227732

Synonym: MM_1630

Alternate gene names: NA

Gene position: 1944780-1945511 (Clockwise)

Preceding gene: 21227731

Following gene: 21227733

Centisome position: 47.48

GC content: 46.45

Gene sequence:

>732_bases
TTGGTTAAGTGCCGAAAGTTCGGATTGCTTATTTTAAGCCTGATTATGCTGTTTATATTTGCAGCTGTAAATGCGACCGC
TTTATCTGAAGATAATGATTCTATCGGAGATGCTCCCGATCTGCCTCTCATCCTGCAGGGCGAGATGGATTTAAACGGAC
AACCTGCTTCAGCAGGCTGTGAAATTACGGCATATTATGAGGGTGAGCTGATTGCAAAAAGTACCGTAGGGGAGGGGGGC
AGGTACAGCCTGTACCTGAATATGACTCCTGAAAACTACACCAACATAGGGGATGTGGAGCTCTATGTCGATGGAAATAA
AGCCAGTTCCGGGATTCCCGTTTCTAATATCGAAAATATTGAAAGTAAAGAACCGGGCTCGATCATTGAAGTTGACATAA
ACAATTCCGCCTCTTCCAGTGTCAGCGGAACGGAATCAAGAGGCAGCAGCGGTTCAACAGGTGAAGCCAGAGTCGTGAAT
AAGAACGAGACTGCTGATTCTAAAACCTCTGATAAAGCCGGAGGACGTTCAGAAGCAAGCCTGGCTGGTGAGGATGATGG
GGATATTGTTAGCTCAGAAGAGCCTGTTTCTCAGTCAGATGATGCGGAAGACCTTGAAGACGAGGATGCTGAAGGTGCTG
AAAACACTGAGGATGCAGGTTACTCGACAGTCTTCACGGCACTGGTCTTTATTGCGGCTCTTTTCAGTGCTGTTATGGTC
ATTAAGAGGTAA

Upstream 100 bases:

>100_bases
GAAACTGTGGTGTCTTCACTGTTTGAACAAAAAGGGGTCAGGCCAGAGTAGTGGTTTCATAAGCTATACATTTAGCTAAG
TGAAGTAGGGGGAAATAATT

Downstream 100 bases:

>100_bases
CCGTCAGGAATGATAGTAAACTGGATATGCAAGCCCGGAAAAGCAGGATTTTTTCCTCTTCCCTTTTCCTCTTTATTGTT
TTTTTAAATATGTGTTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MVKCRKFGLLILSLIMLFIFAAVNATALSEDNDSIGDAPDLPLILQGEMDLNGQPASAGCEITAYYEGELIAKSTVGEGG
RYSLYLNMTPENYTNIGDVELYVDGNKASSGIPVSNIENIESKEPGSIIEVDINNSASSSVSGTESRGSSGSTGEARVVN
KNETADSKTSDKAGGRSEASLAGEDDGDIVSSEEPVSQSDDAEDLEDEDAEGAENTEDAGYSTVFTALVFIAALFSAVMV
IKR

Sequences:

>Translated_243_residues
MVKCRKFGLLILSLIMLFIFAAVNATALSEDNDSIGDAPDLPLILQGEMDLNGQPASAGCEITAYYEGELIAKSTVGEGG
RYSLYLNMTPENYTNIGDVELYVDGNKASSGIPVSNIENIESKEPGSIIEVDINNSASSSVSGTESRGSSGSTGEARVVN
KNETADSKTSDKAGGRSEASLAGEDDGDIVSSEEPVSQSDDAEDLEDEDAEGAENTEDAGYSTVFTALVFIAALFSAVMV
IKR
>Mature_243_residues
MVKCRKFGLLILSLIMLFIFAAVNATALSEDNDSIGDAPDLPLILQGEMDLNGQPASAGCEITAYYEGELIAKSTVGEGG
RYSLYLNMTPENYTNIGDVELYVDGNKASSGIPVSNIENIESKEPGSIIEVDINNSASSSVSGTESRGSSGSTGEARVVN
KNETADSKTSDKAGGRSEASLAGEDDGDIVSSEEPVSQSDDAEDLEDEDAEGAENTEDAGYSTVFTALVFIAALFSAVMV
IKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25463; Mature: 25463

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKCRKFGLLILSLIMLFIFAAVNATALSEDNDSIGDAPDLPLILQGEMDLNGQPASAGC
CCCHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
EITAYYEGELIAKSTVGEGGRYSLYLNMTPENYTNIGDVELYVDGNKASSGIPVSNIENI
EEEEEECCEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
ESKEPGSIIEVDINNSASSSVSGTESRGSSGSTGEARVVNKNETADSKTSDKAGGRSEAS
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
LAGEDDGDIVSSEEPVSQSDDAEDLEDEDAEGAENTEDAGYSTVFTALVFIAALFSAVMV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IKR
HCC
>Mature Secondary Structure
MVKCRKFGLLILSLIMLFIFAAVNATALSEDNDSIGDAPDLPLILQGEMDLNGQPASAGC
CCCHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
EITAYYEGELIAKSTVGEGGRYSLYLNMTPENYTNIGDVELYVDGNKASSGIPVSNIENI
EEEEEECCEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
ESKEPGSIIEVDINNSASSSVSGTESRGSSGSTGEARVVNKNETADSKTSDKAGGRSEAS
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
LAGEDDGDIVSSEEPVSQSDDAEDLEDEDAEGAENTEDAGYSTVFTALVFIAALFSAVMV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IKR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA