| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227693
Identifier: 21227693
GI number: 21227693
Start: 1895432
End: 1896337
Strand: Direct
Name: 21227693
Synonym: MM_1591
Alternate gene names: NA
Gene position: 1895432-1896337 (Clockwise)
Preceding gene: 21227692
Following gene: 21227694
Centisome position: 46.27
GC content: 40.84
Gene sequence:
>906_bases ATGCTTGCCATATATCTCATTATTCTGATTTTTTTACTTATTTTATTTGTACTTCTCACGGCAATAGTCTTTACCTTCAA GCTTAAGGCCCTGAGTTTGAAAGAAAAGAACGAACTGGAAGGCACAGTAACCGTTAAATGGCTCTTTTTTTCCCACACTT TTTTAATTGGAGAACCCGGCGAGAAAAAATATTCTCCTGATGAGTCAGATATGGAGGATAAGGGAAATGAAAAAGTAATT GAAACCGAAAATCGGCAGGACGAATCAGTACCTGAAGAAATCAAAATCAGGGATGAAGGCCGGGAAGCAGAATATAAAAT TCAGGTAGATGAAAGCAGAGAGCCCGTAAAAGAGAGACCTGAGGAGAAAACATTTGCTCCTGAAGGTGAAGATAGAACCC GGGCTGAAGAAAAAATCCGGGTTGAAAAGAAAAGAGGGATATTTGACCGTATAAAAGGGAAGAAAAGTTCTGCAAGGGAT GTTGAGGTTGAAGAAGAGGACGGAATGACCATCAAGGAAAAGCTTCACTGGGGTCTGGAAGCTTACAAAGCTCTTAGAAA GCCTCTTTTCCGACTGTTTTCTGACATGCTCAATGCAATAAAAATTAAATACCTGAAAGCTGACCTCACTTTCGGGCTTC CGGACCCCGCGGATACAGGAATGCTTTGCGGGCTTATACATGCTATTCTGGGGACGATTTACAGCCGCTGTAGGCGCTGC AGTTTTTCTGTCTGTCCGGTTTTTATGGAGACACTGCTGGATTTTCACGGGAGCGCGGAGATCCGTGTAAAAATATATTC ACTGATTTTCCCATTCCTTAAATTTATATTTAACGGGAAAACTTTATCTTTTACTTATTTGATTGTTAAGGAAAAACTTC GGGGCAGTTCGAAGATTAACTCCTAA
Upstream 100 bases:
>100_bases TCCAGGTTAAAACTTTTTAAGGGATTTTACTGGAATCTGAATTGACGGTTAAAGTGGTCAGGATAGTCAGGACTGTCCTT CTTCCCTCAAAATGTTCAGC
Downstream 100 bases:
>100_bases GCTTTATGAATAAGCAATGAGGATACAGATGAATATGATTAATGTGGTGTCTCCGTCCAGACTCCATCTCACCCTTATTG ATCTCAATGCGGAGATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPGEKKYSPDESDMEDKGNEKVI ETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERPEEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARD VEVEEEDGMTIKEKLHWGLEAYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKINS
Sequences:
>Translated_301_residues MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPGEKKYSPDESDMEDKGNEKVI ETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERPEEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARD VEVEEEDGMTIKEKLHWGLEAYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKINS >Mature_301_residues MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPGEKKYSPDESDMEDKGNEKVI ETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERPEEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARD VEVEEEDGMTIKEKLHWGLEAYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKINS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34768; Mature: 34768
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEECCC EKKYSPDESDMEDKGNEKVIETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERP CCCCCCCCCCHHCCCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHCC EEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARDVEVEEEDGMTIKEKLHWGLE CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH AYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKIN CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEHEEHHHHHCCCCCCC S C >Mature Secondary Structure MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEECCC EKKYSPDESDMEDKGNEKVIETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERP CCCCCCCCCCHHCCCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHCC EEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARDVEVEEEDGMTIKEKLHWGLE CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH AYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKIN CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEHEEHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA