| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227694
Identifier: 21227694
GI number: 21227694
Start: 1896354
End: 1897337
Strand: Direct
Name: 21227694
Synonym: MM_1592
Alternate gene names: NA
Gene position: 1896354-1897337 (Clockwise)
Preceding gene: 21227693
Following gene: 21227695
Centisome position: 46.29
GC content: 49.39
Gene sequence:
>984_bases ATGAGGATACAGATGAATATGATTAATGTGGTGTCTCCGTCCAGACTCCATCTCACCCTTATTGATCTCAATGCGGAGAT TGGCAGGGTAGACGGAGGGGTAGGAATCACTCTCGAGTCACCCAGCCTGGAAATTTCGGCATCTGAAGCGGATACGGTTG AAGTTGTGGGTTCTTCTCTTCTCGCAGGCAGGATGCTAAAAGCAGCAAAAGCTGTAATTCCGGAAGGAAAGGGGATCAAA ATCCATATTAAAAGAGATCTCCCTGACCACGTGGGTCTCGGTTCCGGAACCCAGGCTGCGCTTTCGGTAGCTGCAGCCAT AAATGAGATTTACGGGCTTGGTAAAAGTGTCAGGGAACTCGCAGTTGCAGTGGGCAGAGGAGGGACTTCCGGAATAGGGG TTGCTGCCTTTGAATATGGAGGTTTTATCCTGGACGGAGGTCACAGGTTCAGGGATAAAGGTGCATTTTCTCCTTCCGCA GCCAGCCGTATGCCTCCTGGGCCTGTACTTTTCAGAAGAGCGTTTCCTGACTGGAATATTGTCCTTGCAATCCCCAATAC AAAAGGAGTTCATGATGCGGAAGAAGTGGATATTTTCAAAAAAGCCTGTCCGATCCCTCTCTCAGAAGTTCAGGAGATCT CTCACGTAATTCTTATGCAGATGCTGCCTGCGCTTATCGAAGAAGATATAGACAGTTTTGGCCGCGCGGTTAACCATTTT CAGACTGTGGGCTTCAAAAAGAGGGAAGTTGAACTTCAGCCCGAAACCGTGCTCAATGTCATGAAATACATGCAGGACAA CGGAGCAAGCGGTTCGGGAGTCAGTTCTTTCGGGCCTGTTGTTTACGGAATTGTCGAAAGTTCCGTAGAGGCTGGAAGGC TCCAGAAAGAGGTCCAGCGTATGCTTGACGAATCATTAGGTGGAGAAGTTCTGCTTACAAAAGGAAGGAACCGGGGCGCG GACATCTTCGGGGGCTCTGATTGA
Upstream 100 bases:
>100_bases TTTATATTTAACGGGAAAACTTTATCTTTTACTTATTTGATTGTTAAGGAAAAACTTCGGGGCAGTTCGAAGATTAACTC CTAAGCTTTATGAATAAGCA
Downstream 100 bases:
>100_bases AAGTCAATACCTGGTTTGGTGTCCTTGAGCTGGACAGTAACGGAAAAACTCTTTCCTCCGAGGTTTTTCCAAAGGATATA AGAGAGCTTGCTCTTCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSLLAGRMLKAAKAVIPEGKGIK IHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSA ASRMPPGPVLFRRAFPDWNIVLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQRMLDESLGGEVLLTKGRNRGA DIFGGSD
Sequences:
>Translated_327_residues MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSLLAGRMLKAAKAVIPEGKGIK IHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSA ASRMPPGPVLFRRAFPDWNIVLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQRMLDESLGGEVLLTKGRNRGA DIFGGSD >Mature_327_residues MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSLLAGRMLKAAKAVIPEGKGIK IHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSA ASRMPPGPVLFRRAFPDWNIVLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQRMLDESLGGEVLLTKGRNRGA DIFGGSD
Specific function: Unknown
COG id: COG1907
COG function: function code R; Predicted archaeal sugar kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004422 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 34740; Mature: 34740
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSL CEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH LAGRMLKAAKAVIPEGKGIKIHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVREL HHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH AVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSAASRMPPGPVLFRRAFPDWNI HHHHCCCCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEHEECCCCCEE VLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQR HHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLDESLGGEVLLTKGRNRGADIFGGSD HHHHCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSL CEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH LAGRMLKAAKAVIPEGKGIKIHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVREL HHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH AVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSAASRMPPGPVLFRRAFPDWNI HHHHCCCCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEHEECCCCCEE VLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQR HHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLDESLGGEVLLTKGRNRGADIFGGSD HHHHCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]