Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227694

Identifier: 21227694

GI number: 21227694

Start: 1896354

End: 1897337

Strand: Direct

Name: 21227694

Synonym: MM_1592

Alternate gene names: NA

Gene position: 1896354-1897337 (Clockwise)

Preceding gene: 21227693

Following gene: 21227695

Centisome position: 46.29

GC content: 49.39

Gene sequence:

>984_bases
ATGAGGATACAGATGAATATGATTAATGTGGTGTCTCCGTCCAGACTCCATCTCACCCTTATTGATCTCAATGCGGAGAT
TGGCAGGGTAGACGGAGGGGTAGGAATCACTCTCGAGTCACCCAGCCTGGAAATTTCGGCATCTGAAGCGGATACGGTTG
AAGTTGTGGGTTCTTCTCTTCTCGCAGGCAGGATGCTAAAAGCAGCAAAAGCTGTAATTCCGGAAGGAAAGGGGATCAAA
ATCCATATTAAAAGAGATCTCCCTGACCACGTGGGTCTCGGTTCCGGAACCCAGGCTGCGCTTTCGGTAGCTGCAGCCAT
AAATGAGATTTACGGGCTTGGTAAAAGTGTCAGGGAACTCGCAGTTGCAGTGGGCAGAGGAGGGACTTCCGGAATAGGGG
TTGCTGCCTTTGAATATGGAGGTTTTATCCTGGACGGAGGTCACAGGTTCAGGGATAAAGGTGCATTTTCTCCTTCCGCA
GCCAGCCGTATGCCTCCTGGGCCTGTACTTTTCAGAAGAGCGTTTCCTGACTGGAATATTGTCCTTGCAATCCCCAATAC
AAAAGGAGTTCATGATGCGGAAGAAGTGGATATTTTCAAAAAAGCCTGTCCGATCCCTCTCTCAGAAGTTCAGGAGATCT
CTCACGTAATTCTTATGCAGATGCTGCCTGCGCTTATCGAAGAAGATATAGACAGTTTTGGCCGCGCGGTTAACCATTTT
CAGACTGTGGGCTTCAAAAAGAGGGAAGTTGAACTTCAGCCCGAAACCGTGCTCAATGTCATGAAATACATGCAGGACAA
CGGAGCAAGCGGTTCGGGAGTCAGTTCTTTCGGGCCTGTTGTTTACGGAATTGTCGAAAGTTCCGTAGAGGCTGGAAGGC
TCCAGAAAGAGGTCCAGCGTATGCTTGACGAATCATTAGGTGGAGAAGTTCTGCTTACAAAAGGAAGGAACCGGGGCGCG
GACATCTTCGGGGGCTCTGATTGA

Upstream 100 bases:

>100_bases
TTTATATTTAACGGGAAAACTTTATCTTTTACTTATTTGATTGTTAAGGAAAAACTTCGGGGCAGTTCGAAGATTAACTC
CTAAGCTTTATGAATAAGCA

Downstream 100 bases:

>100_bases
AAGTCAATACCTGGTTTGGTGTCCTTGAGCTGGACAGTAACGGAAAAACTCTTTCCTCCGAGGTTTTTCCAAAGGATATA
AGAGAGCTTGCTCTTCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSLLAGRMLKAAKAVIPEGKGIK
IHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSA
ASRMPPGPVLFRRAFPDWNIVLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF
QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQRMLDESLGGEVLLTKGRNRGA
DIFGGSD

Sequences:

>Translated_327_residues
MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSLLAGRMLKAAKAVIPEGKGIK
IHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSA
ASRMPPGPVLFRRAFPDWNIVLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF
QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQRMLDESLGGEVLLTKGRNRGA
DIFGGSD
>Mature_327_residues
MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSLLAGRMLKAAKAVIPEGKGIK
IHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSA
ASRMPPGPVLFRRAFPDWNIVLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF
QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQRMLDESLGGEVLLTKGRNRGA
DIFGGSD

Specific function: Unknown

COG id: COG1907

COG function: function code R; Predicted archaeal sugar kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004422
- InterPro:   IPR006204
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF00288 GHMP_kinases_N [H]

EC number: NA

Molecular weight: Translated: 34740; Mature: 34740

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSL
CEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH
LAGRMLKAAKAVIPEGKGIKIHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVREL
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
AVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSAASRMPPGPVLFRRAFPDWNI
HHHHCCCCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEHEECCCCCEE
VLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF
EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQR
HHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLDESLGGEVLLTKGRNRGADIFGGSD
HHHHCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRIQMNMINVVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSSL
CEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH
LAGRMLKAAKAVIPEGKGIKIHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVREL
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
AVAVGRGGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSAASRMPPGPVLFRRAFPDWNI
HHHHCCCCCCCCEEEEEECCCEEEECCCEECCCCCCCCCCCCCCCCCCEEHEECCCCCEE
VLAIPNTKGVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAVNHF
EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTVGFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRLQKEVQR
HHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLDESLGGEVLLTKGRNRGADIFGGSD
HHHHCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]