Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227692

Identifier: 21227692

GI number: 21227692

Start: 1894880

End: 1895326

Strand: Direct

Name: 21227692

Synonym: MM_1590

Alternate gene names: NA

Gene position: 1894880-1895326 (Clockwise)

Preceding gene: 21227689

Following gene: 21227693

Centisome position: 46.26

GC content: 46.76

Gene sequence:

>447_bases
ATGGGTGTAGAAGATACTATTAAACAAATTGCGAGCGAACTTGAAAAAATTGCAACTACAAAAACCGTAGTTGGGGACCC
TATTACTGCTGCCGGGAAAACAATTATTCCTGTTTCCAAACTTACAATGGGCTTTGGAGGAGGAGGCGGGGAAGGCGGCA
AGAAGGAATCCGACATTGGATACGGTGGTGGAGGCGGTGCAGGCGCTAAGATCGAGCCTATCGCTTTTATTATGCTCTCC
GAGGATGATGCAAAGATCTTCAGGATCTCTGAGAAAGGAGATGTAGGTGCAATCCTTGGTTCCATTCAGGAGGCAGTGCC
TGAGCTTCTGGACAAAATCAAAGGCAAAACCGGAAAACATAAAAAAGAAGGGAGCTCCGAAGCCGTTAAAACAGAGGTCA
AAGAGCACACGGAGATTGAAGTCGAGAAAGGGGGCTGTTTCCACTAA

Upstream 100 bases:

>100_bases
AAAGATAATATTATAATAATCTGGATTGAAAATCTAAAACATATAGATAACATTTATTATCCACGTAAACAGATGATACT
AACACATCGGGGGAAACTAG

Downstream 100 bases:

>100_bases
ATCCCTCCAGGTTAAAACTTTTTAAGGGATTTTACTGGAATCTGAATTGACGGTTAAAGTGGTCAGGATAGTCAGGACTG
TCCTTCTTCCCTCAAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGVEDTIKQIASELEKIATTKTVVGDPITAAGKTIIPVSKLTMGFGGGGGEGGKKESDIGYGGGGGAGAKIEPIAFIMLS
EDDAKIFRISEKGDVGAILGSIQEAVPELLDKIKGKTGKHKKEGSSEAVKTEVKEHTEIEVEKGGCFH

Sequences:

>Translated_148_residues
MGVEDTIKQIASELEKIATTKTVVGDPITAAGKTIIPVSKLTMGFGGGGGEGGKKESDIGYGGGGGAGAKIEPIAFIMLS
EDDAKIFRISEKGDVGAILGSIQEAVPELLDKIKGKTGKHKKEGSSEAVKTEVKEHTEIEVEKGGCFH
>Mature_147_residues
GVEDTIKQIASELEKIATTKTVVGDPITAAGKTIIPVSKLTMGFGGGGGEGGKKESDIGYGGGGGAGAKIEPIAFIMLSE
DDAKIFRISEKGDVGAILGSIQEAVPELLDKIKGKTGKHKKEGSSEAVKTEVKEHTEIEVEKGGCFH

Specific function: Unknown

COG id: COG3874

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15270; Mature: 15138

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVEDTIKQIASELEKIATTKTVVGDPITAAGKTIIPVSKLTMGFGGGGGEGGKKESDIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCC
YGGGGGAGAKIEPIAFIMLSEDDAKIFRISEKGDVGAILGSIQEAVPELLDKIKGKTGKH
CCCCCCCCCEECEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
KKEGSSEAVKTEVKEHTEIEVEKGGCFH
CCCCCHHHHHHHHHHCCEEEECCCCCCC
>Mature Secondary Structure 
GVEDTIKQIASELEKIATTKTVVGDPITAAGKTIIPVSKLTMGFGGGGGEGGKKESDIG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCC
YGGGGGAGAKIEPIAFIMLSEDDAKIFRISEKGDVGAILGSIQEAVPELLDKIKGKTGKH
CCCCCCCCCEECEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
KKEGSSEAVKTEVKEHTEIEVEKGGCFH
CCCCCHHHHHHHHHHCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA