| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227593
Identifier: 21227593
GI number: 21227593
Start: 1777268
End: 1778611
Strand: Reverse
Name: 21227593
Synonym: MM_1491
Alternate gene names: NA
Gene position: 1778611-1777268 (Counterclockwise)
Preceding gene: 21227595
Following gene: 21227592
Centisome position: 43.42
GC content: 48.88
Gene sequence:
>1344_bases ATGCACGAAAGAGAGAGTAAAGATTTAAGACCTGCGTCTGGGGGAAAGTTCGGCGGGACACTGCGTGTCCTCGGTAATGA AGAAAACAACGGGGAAGGGCTTCTGTTTCTTGGGAACTATATGGCGCTCGACCATTCAAGGGGAGCTGACGTTTATCTCG ATGCCCTGAAACCTCATGCCGTTTTGATCTGTGGAAAAAGAGGGTACGGAAAATCTTATACAATGGGCTGCATGCTGGAG GAGCTTGCATTTCTTCCTGAGCCTGTTAAAGGAAACCTTGCAGCCCTTATTATCGACACTATGGGGATTTTCTGGACGAT GAGGACTCCGAACTCATCCGAAGCAGGAAGACTGAAAAGCTGGGGACTCCCTCCTGCAGGGCTTGAAATAGAGGTTTTCG TGCCAGCTGGGAATATTGAAGCTTATAAGAAACGAAACATAGAGGTAAAGCCTTTTTCGATCTCAATTCGGGAACTCTCA GGTAGCCAGTGGTGCAGGATTCTCAGGGTCGAAGAGGTTTCTCCCCTTGGAATTCTGCTTGTAAGAGTTGTCGAATCCCT GAGGGAGAAGGAAGACCCGTATTCTTTTGAAGATATTATTAACGAGATATTTCTGGACGAGAGATCGGATTCAGCATCAA AAGGGGCTGCTGAAAACTATTTCAGGGCTGTGAAATCATGGGGTCTGTTCTCCAAAGAAGGAACGCCCCTGTCAGTATTG ATAGCAGGAGGCAGGACAACAATCCTGGATGTAAGCACCCTTGAAAACGAAAACGTCTGCGCTGCGGCAGTGTCGATTCT TGCAGGCAGGCTTTATGCAGAACGGCTTGAGGCAAGAAGGCTCTACGAAAAGAAACAGATGGGGGAAAAATTAGAAGAAA AAGAATTCCCCATGGTCTGGCTGTTTATAGACGAAGCCCATATTTTCGTACCTGCGAAAGCTGAAAGCCTTGCTTCCGAA GTTCTTATAAACCGATGCCTCCGGCAGGGAAGGCAGCCCGGTCTCTCCCTTGTACTTGCAACCCAGAGACCTGCAAGCCT CCACCCTGATGTTGTCTCGCAGAGCGACCTTCTTATCTGCCACCGCCTCACCTCAAGTGACGACATCCTCGCCCTTGAGA GTTCCAGGCCCCTTTATATGCAGGAAAGCCTCAGGGCATACCTGAAGAAAATGGGGAGCGAAAGGGGTGCTGCATTGATA GTTGACGACCATTCCGAATCTGTCCATATGGTCCGAATCCGCCCAAGAAGGAGCTGGCACGGAGGAGGAGAGCCAAGTGC ACTCGACCCCTGCAAAAGGGAAAAAGAAGAAATAAAAATTCAAATCCCGGAGAAATTCAGATAA
Upstream 100 bases:
>100_bases TGAAAAGGAACACTGTGGAGGGAAACTTAAAAATTAAGAATTTTATTTTACATGTTCAGAATAAATTATTTTAAGTAGTT TTCTATCAGATACAAACGTG
Downstream 100 bases:
>100_bases ATTGAATCAGGACTTTAAAATAAGCATCTGTTTACCGAATTTCCAGGCAAAATAGCGTAAAACGTAAATAATTATTAAGC ATTCGTTAACCTTTTTTTGA
Product: putative nucleotidyltransferase
Products: NA
Alternate protein names: ATPase; Nucleotidyltransferase; Bipolar DNA Helicase
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MHERESKDLRPASGGKFGGTLRVLGNEENNGEGLLFLGNYMALDHSRGADVYLDALKPHAVLICGKRGYGKSYTMGCMLE ELAFLPEPVKGNLAALIIDTMGIFWTMRTPNSSEAGRLKSWGLPPAGLEIEVFVPAGNIEAYKKRNIEVKPFSISIRELS GSQWCRILRVEEVSPLGILLVRVVESLREKEDPYSFEDIINEIFLDERSDSASKGAAENYFRAVKSWGLFSKEGTPLSVL IAGGRTTILDVSTLENENVCAAAVSILAGRLYAERLEARRLYEKKQMGEKLEEKEFPMVWLFIDEAHIFVPAKAESLASE VLINRCLRQGRQPGLSLVLATQRPASLHPDVVSQSDLLICHRLTSSDDILALESSRPLYMQESLRAYLKKMGSERGAALI VDDHSESVHMVRIRPRRSWHGGGEPSALDPCKREKEEIKIQIPEKFR
Sequences:
>Translated_447_residues MHERESKDLRPASGGKFGGTLRVLGNEENNGEGLLFLGNYMALDHSRGADVYLDALKPHAVLICGKRGYGKSYTMGCMLE ELAFLPEPVKGNLAALIIDTMGIFWTMRTPNSSEAGRLKSWGLPPAGLEIEVFVPAGNIEAYKKRNIEVKPFSISIRELS GSQWCRILRVEEVSPLGILLVRVVESLREKEDPYSFEDIINEIFLDERSDSASKGAAENYFRAVKSWGLFSKEGTPLSVL IAGGRTTILDVSTLENENVCAAAVSILAGRLYAERLEARRLYEKKQMGEKLEEKEFPMVWLFIDEAHIFVPAKAESLASE VLINRCLRQGRQPGLSLVLATQRPASLHPDVVSQSDLLICHRLTSSDDILALESSRPLYMQESLRAYLKKMGSERGAALI VDDHSESVHMVRIRPRRSWHGGGEPSALDPCKREKEEIKIQIPEKFR >Mature_447_residues MHERESKDLRPASGGKFGGTLRVLGNEENNGEGLLFLGNYMALDHSRGADVYLDALKPHAVLICGKRGYGKSYTMGCMLE ELAFLPEPVKGNLAALIIDTMGIFWTMRTPNSSEAGRLKSWGLPPAGLEIEVFVPAGNIEAYKKRNIEVKPFSISIRELS GSQWCRILRVEEVSPLGILLVRVVESLREKEDPYSFEDIINEIFLDERSDSASKGAAENYFRAVKSWGLFSKEGTPLSVL IAGGRTTILDVSTLENENVCAAAVSILAGRLYAERLEARRLYEKKQMGEKLEEKEFPMVWLFIDEAHIFVPAKAESLASE VLINRCLRQGRQPGLSLVLATQRPASLHPDVVSQSDLLICHRLTSSDDILALESSRPLYMQESLRAYLKKMGSERGAALI VDDHSESVHMVRIRPRRSWHGGGEPSALDPCKREKEEIKIQIPEKFR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49897; Mature: 49897
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERESKDLRPASGGKFGGTLRVLGNEENNGEGLLFLGNYMALDHSRGADVYLDALKPHA CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECEEEEECCCCCCEEEECCCCCE VLICGKRGYGKSYTMGCMLEELAFLPEPVKGNLAALIIDTMGIFWTMRTPNSSEAGRLKS EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC WGLPPAGLEIEVFVPAGNIEAYKKRNIEVKPFSISIRELSGSQWCRILRVEEVSPLGILL CCCCCCCEEEEEEEECCCCHHHHHCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHH VRVVESLREKEDPYSFEDIINEIFLDERSDSASKGAAENYFRAVKSWGLFSKEGTPLSVL HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE IAGGRTTILDVSTLENENVCAAAVSILAGRLYAERLEARRLYEKKQMGEKLEEKEFPMVW EECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LFIDEAHIFVPAKAESLASEVLINRCLRQGRQPGLSLVLATQRPASLHPDVVSQSDLLIC EEEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE HRLTSSDDILALESSRPLYMQESLRAYLKKMGSERGAALIVDDHSESVHMVRIRPRRSWH EECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCC GGGEPSALDPCKREKEEIKIQIPEKFR CCCCCCCCCHHHCCCCEEEEECCCCCC >Mature Secondary Structure MHERESKDLRPASGGKFGGTLRVLGNEENNGEGLLFLGNYMALDHSRGADVYLDALKPHA CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECEEEEECCCCCCEEEECCCCCE VLICGKRGYGKSYTMGCMLEELAFLPEPVKGNLAALIIDTMGIFWTMRTPNSSEAGRLKS EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC WGLPPAGLEIEVFVPAGNIEAYKKRNIEVKPFSISIRELSGSQWCRILRVEEVSPLGILL CCCCCCCEEEEEEEECCCCHHHHHCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHH VRVVESLREKEDPYSFEDIINEIFLDERSDSASKGAAENYFRAVKSWGLFSKEGTPLSVL HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE IAGGRTTILDVSTLENENVCAAAVSILAGRLYAERLEARRLYEKKQMGEKLEEKEFPMVW EECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LFIDEAHIFVPAKAESLASEVLINRCLRQGRQPGLSLVLATQRPASLHPDVVSQSDLLIC EEEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE HRLTSSDDILALESSRPLYMQESLRAYLKKMGSERGAALIVDDHSESVHMVRIRPRRSWH EECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCC GGGEPSALDPCKREKEEIKIQIPEKFR CCCCCCCCCHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA