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The map label for this gene is yrbH [C]

Identifier: 21227420

GI number: 21227420

Start: 1570823

End: 1571917

Strand: Direct

Name: yrbH [C]

Synonym: MM_1318

Alternate gene names: 21227420

Gene position: 1570823-1571917 (Clockwise)

Preceding gene: 21227419

Following gene: 21227421

Centisome position: 38.35

GC content: 42.01

Gene sequence:

>1095_bases
TTGAAATCTTCACTGAAAATCGGAAGCGTTCTGGGCATACCTATCAAGCTGCATATCACTTTTCTTTTAATCCTTCCTGT
TTTTGCATATATATTTGCAATTAATCCATACCCTTATGGCTTTCAGGAAGTTGAGCCTGCTTCGACAAAATACATGCTTT
CATCCCTGACTGCAATTTTACTTTTCGCCTCAATCCTTTTACACGAGCTTGCACACTCATACCTTGCAAAACAATACGGG
GTTAATATTGAGAGTATTACGCTCTTCCTTTTTGGAGGAGTATCTTCAATGGAAGAGATACCAAGAGACCCCGGACAGGA
AGCAAAGATGGCTTTTGCAGGACCTTTTACGAGCCTGGTAATAGGTTCTATCTGTCTTCTGTTATACAGGTATATAATTC
TGTCAAATCCTGCGCTATCTGAAAATCCTGTTTATCTGACAATCTGGATTCTCGGGGCAATGAACCTGGTGCTTGGAATC
TTCAATCTGCTGCCTGCATTTCCAATGGATGGAGGGAGAGTACTGCGTTCTTTCTATGCTAGGAGGATGTCCTATGTCAA
AGCTACCAAGAGCGCAGCTGCCGTAGGAAAATTTTTCGCCATTCTGATGGCTATTTTTGGAATCCTTATTGGAAACCTCT
GGTTCCCACTTATTGCTCTCTTCATTTACGCTGGCGCTTCCGAGGAAGAGCGTTCTACTCAAGCATCCGTAAGTCTGGAA
AATATTCTGGTAAAAGACATAATGACAAAAGAAGTAGTTTCAGTTCCCCCTTCCATGAATGTTGAAGATCTAATTCAGTT
TATGTTTGAGAAAAAACATATGGGCTATCCTGTGGTAGAAAGCGGCAACCTGAAAGGAATCGTAACTTTTACAGATATCC
AGCGCGTTCCCACCATTGACCGCCCTGTGATGCGGGTCTCAGATATCATGACAAGAGATATAATATCTGTTCCTTCTGAT
GCACAGGCAAGTGATGTCCTCAAACTGGTTACATCCAAAAATATCGGAAGGGTTCTGGTAATTGATAATGGATCTCTTGT
AGGGGTGCTCTCCAGAACAGATCTGGTCAGGATACTCAAACTCAGATCAGAATAA

Upstream 100 bases:

>100_bases
TATATGTTCTAACTTTTATGATTCCTGGCTCTTAAGTAGATTAATTGGTATAGTTATCAAGTATTTATATTTACGAAAAC
TAAAAGGGGGTAATTACTTC

Downstream 100 bases:

>100_bases
CAAACATAATAAAATTAAAATTTAGATCTGAATAATGAATCTGATGGAATTAAAATTCAGATTAGAATAGTAATCTGATA
GAATAGTGAATCGGATCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Site-2-type intermembrane protease [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKSSLKIGSVLGIPIKLHITFLLILPVFAYIFAINPYPYGFQEVEPASTKYMLSSLTAILLFASILLHELAHSYLAKQYG
VNIESITLFLFGGVSSMEEIPRDPGQEAKMAFAGPFTSLVIGSICLLLYRYIILSNPALSENPVYLTIWILGAMNLVLGI
FNLLPAFPMDGGRVLRSFYARRMSYVKATKSAAAVGKFFAILMAIFGILIGNLWFPLIALFIYAGASEEERSTQASVSLE
NILVKDIMTKEVVSVPPSMNVEDLIQFMFEKKHMGYPVVESGNLKGIVTFTDIQRVPTIDRPVMRVSDIMTRDIISVPSD
AQASDVLKLVTSKNIGRVLVIDNGSLVGVLSRTDLVRILKLRSE

Sequences:

>Translated_364_residues
MKSSLKIGSVLGIPIKLHITFLLILPVFAYIFAINPYPYGFQEVEPASTKYMLSSLTAILLFASILLHELAHSYLAKQYG
VNIESITLFLFGGVSSMEEIPRDPGQEAKMAFAGPFTSLVIGSICLLLYRYIILSNPALSENPVYLTIWILGAMNLVLGI
FNLLPAFPMDGGRVLRSFYARRMSYVKATKSAAAVGKFFAILMAIFGILIGNLWFPLIALFIYAGASEEERSTQASVSLE
NILVKDIMTKEVVSVPPSMNVEDLIQFMFEKKHMGYPVVESGNLKGIVTFTDIQRVPTIDRPVMRVSDIMTRDIISVPSD
AQASDVLKLVTSKNIGRVLVIDNGSLVGVLSRTDLVRILKLRSE
>Mature_364_residues
MKSSLKIGSVLGIPIKLHITFLLILPVFAYIFAINPYPYGFQEVEPASTKYMLSSLTAILLFASILLHELAHSYLAKQYG
VNIESITLFLFGGVSSMEEIPRDPGQEAKMAFAGPFTSLVIGSICLLLYRYIILSNPALSENPVYLTIWILGAMNLVLGI
FNLLPAFPMDGGRVLRSFYARRMSYVKATKSAAAVGKFFAILMAIFGILIGNLWFPLIALFIYAGASEEERSTQASVSLE
NILVKDIMTKEVVSVPPSMNVEDLIQFMFEKKHMGYPVVESGNLKGIVTFTDIQRVPTIDRPVMRVSDIMTRDIISVPSD
AQASDVLKLVTSKNIGRVLVIDNGSLVGVLSRTDLVRILKLRSE

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 40169; Mature: 40169

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLKIGSVLGIPIKLHITFLLILPVFAYIFAINPYPYGFQEVEPASTKYMLSSLTAIL
CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LFASILLHELAHSYLAKQYGVNIESITLFLFGGVSSMEEIPRDPGQEAKMAFAGPFTSLV
HHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHHHHCCCCCCCCCCEECCCHHHHHH
IGSICLLLYRYIILSNPALSENPVYLTIWILGAMNLVLGIFNLLPAFPMDGGRVLRSFYA
HHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RRMSYVKATKSAAAVGKFFAILMAIFGILIGNLWFPLIALFIYAGASEEERSTQASVSLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NILVKDIMTKEVVSVPPSMNVEDLIQFMFEKKHMGYPVVESGNLKGIVTFTDIQRVPTID
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECHHHCCCCC
RPVMRVSDIMTRDIISVPSDAQASDVLKLVTSKNIGRVLVIDNGSLVGVLSRTDLVRILK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHH
LRSE
HCCC
>Mature Secondary Structure
MKSSLKIGSVLGIPIKLHITFLLILPVFAYIFAINPYPYGFQEVEPASTKYMLSSLTAIL
CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LFASILLHELAHSYLAKQYGVNIESITLFLFGGVSSMEEIPRDPGQEAKMAFAGPFTSLV
HHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHHHHCCCCCCCCCCEECCCHHHHHH
IGSICLLLYRYIILSNPALSENPVYLTIWILGAMNLVLGIFNLLPAFPMDGGRVLRSFYA
HHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RRMSYVKATKSAAAVGKFFAILMAIFGILIGNLWFPLIALFIYAGASEEERSTQASVSLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NILVKDIMTKEVVSVPPSMNVEDLIQFMFEKKHMGYPVVESGNLKGIVTFTDIQRVPTID
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECHHHCCCCC
RPVMRVSDIMTRDIISVPSDAQASDVLKLVTSKNIGRVLVIDNGSLVGVLSRTDLVRILK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHH
LRSE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]