| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227391
Identifier: 21227391
GI number: 21227391
Start: 1530765
End: 1531022
Strand: Reverse
Name: 21227391
Synonym: MM_1289
Alternate gene names: NA
Gene position: 1531022-1530765 (Counterclockwise)
Preceding gene: 21227392
Following gene: 21227390
Centisome position: 37.38
GC content: 45.35
Gene sequence:
>258_bases ATGAGCTGTAGACCTATAAAGTTTCGTAATGTTCCGCCTGATACGTTCGCATGTATGAAGAAAAAGCTTCAGGGAGCAGG GATCAGTGTTCCTTCAGGAAACAGAGGAGAACTCTCGGGATCCGGCATTGTGGCAGATTTCGAATGGGATGGGCAGTCTA ATCTTACGATTACCATCAAAGAAAAGCCGTTTATTGTCAGCTGTGAAGCCGCAGCCATGCGAATAAAACAATTCGTAAGA CAGTGCCACGGTTCATAA
Upstream 100 bases:
>100_bases ACCAGTATACTTTTTATCCCCGGAAGACGATTTTTGTCTAGAAATTCCAGTCAAATACGGGCTTTAGAAATAGTTCTAAG TAGTCAGGGAGGAGAAAACA
Downstream 100 bases:
>100_bases AAAGTCCGGGAGCCTGGTACAGATATGGATGAAAGAAAAATTGACACCGAAGGCTGTCAGGGCATCAAATTCAGAAATGT GACTCCAGCGGTTTTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSCRPIKFRNVPPDTFACMKKKLQGAGISVPSGNRGELSGSGIVADFEWDGQSNLTITIKEKPFIVSCEAAAMRIKQFVR QCHGS
Sequences:
>Translated_85_residues MSCRPIKFRNVPPDTFACMKKKLQGAGISVPSGNRGELSGSGIVADFEWDGQSNLTITIKEKPFIVSCEAAAMRIKQFVR QCHGS >Mature_84_residues SCRPIKFRNVPPDTFACMKKKLQGAGISVPSGNRGELSGSGIVADFEWDGQSNLTITIKEKPFIVSCEAAAMRIKQFVRQ CHGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9274; Mature: 9143
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCRPIKFRNVPPDTFACMKKKLQGAGISVPSGNRGELSGSGIVADFEWDGQSNLTITIK CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC EKPFIVSCEAAAMRIKQFVRQCHGS CCCEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SCRPIKFRNVPPDTFACMKKKLQGAGISVPSGNRGELSGSGIVADFEWDGQSNLTITIK CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC EKPFIVSCEAAAMRIKQFVRQCHGS CCCEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA