Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227390

Identifier: 21227390

GI number: 21227390

Start: 1530459

End: 1530740

Strand: Reverse

Name: 21227390

Synonym: MM_1288

Alternate gene names: NA

Gene position: 1530740-1530459 (Counterclockwise)

Preceding gene: 21227391

Following gene: 21227384

Centisome position: 37.37

GC content: 46.81

Gene sequence:

>282_bases
ATGGATGAAAGAAAAATTGACACCGAAGGCTGTCAGGGCATCAAATTCAGAAATGTGACTCCAGCGGTTTTTTCCTGCAT
GAAGAAAAAACTCCAGGCTTACGGGATCGAAACTTCGCCCGGAAATTCCGGAGTGTTTGAAGGAAATGGCATAGTTGCCG
ATTTTAGCTGGGATGGAGAGGCGAACCTTGTGATTGAGATCAGGGAAAGGCCCTTAACTACTTACTGCGGGCAGGTAAGC
GGAAAACTGAAAGCTTTTATGCGCGAGTGCCAGGGATTTTGA

Upstream 100 bases:

>100_bases
AAAGCCGTTTATTGTCAGCTGTGAAGCCGCAGCCATGCGAATAAAACAATTCGTAAGACAGTGCCACGGTTCATAAAAAG
TCCGGGAGCCTGGTACAGAT

Downstream 100 bases:

>100_bases
GAAAAACGCAAATTTCCCTGAAAATCCGTTTCTTCTCAGTCCTGTTTATTTGAAGCCTGCATATTTTTGCTAAGCCTGTC
CTGTTGAGTTCTTTACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MDERKIDTEGCQGIKFRNVTPAVFSCMKKKLQAYGIETSPGNSGVFEGNGIVADFSWDGEANLVIEIRERPLTTYCGQVS
GKLKAFMRECQGF

Sequences:

>Translated_93_residues
MDERKIDTEGCQGIKFRNVTPAVFSCMKKKLQAYGIETSPGNSGVFEGNGIVADFSWDGEANLVIEIRERPLTTYCGQVS
GKLKAFMRECQGF
>Mature_93_residues
MDERKIDTEGCQGIKFRNVTPAVFSCMKKKLQAYGIETSPGNSGVFEGNGIVADFSWDGEANLVIEIRERPLTTYCGQVS
GKLKAFMRECQGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10302; Mature: 10302

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERKIDTEGCQGIKFRNVTPAVFSCMKKKLQAYGIETSPGNSGVFEGNGIVADFSWDGE
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCC
ANLVIEIRERPLTTYCGQVSGKLKAFMRECQGF
CEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDERKIDTEGCQGIKFRNVTPAVFSCMKKKLQAYGIETSPGNSGVFEGNGIVADFSWDGE
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCC
ANLVIEIRERPLTTYCGQVSGKLKAFMRECQGF
CEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA