Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227384

Identifier: 21227384

GI number: 21227384

Start: 1517995

End: 1518363

Strand: Reverse

Name: 21227384

Synonym: MM_1282

Alternate gene names: NA

Gene position: 1518363-1517995 (Counterclockwise)

Preceding gene: 21227390

Following gene: 21227383

Centisome position: 37.07

GC content: 38.21

Gene sequence:

>369_bases
ATGAGTGATACTGACAGCAGGGATATATTTGACTTTAAGCTTGAAAAGTGGGTTTTAGGTGCGGATGAATGTGCTTTTGC
GAACCTGAGCGCTATAGGGAAGGACAAGCCTCTAAGTCAATATTTGATGGAGTCGATCGAAAACTGGGTAAATAAAGAAG
AGGTATTTTTAACGGACAAATTCATTTCCGAAATGTGCGACTTTATAAAAAGTCAGGATGAAGACCTTTACGACCGTTTA
ATGAAGAAATGTGCTTTAAAAGGAATAAGTGTGGGTGAAGGTATATTTGAAGCACTGAATTTATTGACCTGTGGGGCAGT
AAGTGAACAGCAATGTAGAGAGATTAGAGATAACTCATGTGATGAGTAA

Upstream 100 bases:

>100_bases
CGATGTCAATCATATATCTACTTAAATATCCATTTAATTATAAAAATCGCCTAAAATTGTTAAATATCATGAAGTCTCTT
ATTTTTGTGGAGGATTACAT

Downstream 100 bases:

>100_bases
CCTGGTCAGTCTCTCTAAATGTGCTTCTGTGAAGAATTTTACTAAATTTTATTATATCTTTTTTTGCGGTCTAATATTCT
TTTTGTCTGAGATCCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDKFISEMCDFIKSQDEDLYDRL
MKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSCDE

Sequences:

>Translated_122_residues
MSDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDKFISEMCDFIKSQDEDLYDRL
MKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSCDE
>Mature_121_residues
SDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDKFISEMCDFIKSQDEDLYDRLM
KKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSCDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13925; Mature: 13794

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDK
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHH
FISEMCDFIKSQDEDLYDRLMKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSC
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
DE
CC
>Mature Secondary Structure 
SDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDK
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHH
FISEMCDFIKSQDEDLYDRLMKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSC
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA