Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227383

Identifier: 21227383

GI number: 21227383

Start: 1517264

End: 1517824

Strand: Reverse

Name: 21227383

Synonym: MM_1281

Alternate gene names: NA

Gene position: 1517824-1517264 (Counterclockwise)

Preceding gene: 21227384

Following gene: 21227382

Centisome position: 37.05

GC content: 42.25

Gene sequence:

>561_bases
ATGGATTATATCGAAACATGGAAAGAGGTCATTCAAAGACCTTCTAATTTTTACCGAAAAATGCCAGTGACCGGAGGATA
CGCTGAGCCGCTTACTTTTGCAGCAATCAGTTATCTCATATACGGGCTTTTGAGTGCACTTTTCAACCGCGAAATGATCG
GAGATATGTATGGATATGGAATAGGTTCCGGCGGTCCCGGTCTTTTTAATTCGCTCATTATCGCGATTACGTTTCCCATT
ACGGGTATTATTTCTGTACTCGTAGGGGCTGCAATACTTTACATAATTTATAAAGTGCTTGGTGGCAAAGGGAGCTATGA
AGGTACTGTAAGGTTCATATGCTATGCGACTGCTGTGATGCTGCTTTCCTGGATCCCTTTTATCGGCTGGGTTTTCGGAT
TTTACGGACTATATCTTTATATTCTCGGCGGAATGATTGTACATGATGTCAGTATGGTGAAATCGGCGATAGCTGTACTC
TTGCCTCTAGTCCTGATCATCTTACTGGCCGTGGCTGTAGCAGTATTTGTTCTATCCAGTACTTTTTCAACTCTTGTTTA
A

Upstream 100 bases:

>100_bases
CTAATATTCTTTTTGTCTGAGATCCTGTTTATCTAAAAGCAGATTTCTTTTTGACTCATGTTTAAATATGACTCATGCAT
ATTTTTTATCGGGATATTCT

Downstream 100 bases:

>100_bases
GCATATATCATCCGGGTGTCTCTTTTTAAGAGATAACCCAAAAATTTTTTTACTTATTTCTTAAAATTTTTTATTATTCA
CCTTTTCAAGCTAAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYGIGSGGPGLFNSLIIAITFPI
TGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVMLLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVL
LPLVLIILLAVAVAVFVLSSTFSTLV

Sequences:

>Translated_186_residues
MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYGIGSGGPGLFNSLIIAITFPI
TGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVMLLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVL
LPLVLIILLAVAVAVFVLSSTFSTLV
>Mature_186_residues
MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYGIGSGGPGLFNSLIIAITFPI
TGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVMLLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVL
LPLVLIILLAVAVAVFVLSSTFSTLV

Specific function: Unknown

COG id: COG2881

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20271; Mature: 20271

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYG
CCHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGSGGPGLFNSLIIAITFPITGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVLLPLVLIILLAVAVAVFVLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFSTLV
HHHHHC
>Mature Secondary Structure
MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYG
CCHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGSGGPGLFNSLIIAITFPITGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVLLPLVLIILLAVAVAVFVLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFSTLV
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA