| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227383
Identifier: 21227383
GI number: 21227383
Start: 1517264
End: 1517824
Strand: Reverse
Name: 21227383
Synonym: MM_1281
Alternate gene names: NA
Gene position: 1517824-1517264 (Counterclockwise)
Preceding gene: 21227384
Following gene: 21227382
Centisome position: 37.05
GC content: 42.25
Gene sequence:
>561_bases ATGGATTATATCGAAACATGGAAAGAGGTCATTCAAAGACCTTCTAATTTTTACCGAAAAATGCCAGTGACCGGAGGATA CGCTGAGCCGCTTACTTTTGCAGCAATCAGTTATCTCATATACGGGCTTTTGAGTGCACTTTTCAACCGCGAAATGATCG GAGATATGTATGGATATGGAATAGGTTCCGGCGGTCCCGGTCTTTTTAATTCGCTCATTATCGCGATTACGTTTCCCATT ACGGGTATTATTTCTGTACTCGTAGGGGCTGCAATACTTTACATAATTTATAAAGTGCTTGGTGGCAAAGGGAGCTATGA AGGTACTGTAAGGTTCATATGCTATGCGACTGCTGTGATGCTGCTTTCCTGGATCCCTTTTATCGGCTGGGTTTTCGGAT TTTACGGACTATATCTTTATATTCTCGGCGGAATGATTGTACATGATGTCAGTATGGTGAAATCGGCGATAGCTGTACTC TTGCCTCTAGTCCTGATCATCTTACTGGCCGTGGCTGTAGCAGTATTTGTTCTATCCAGTACTTTTTCAACTCTTGTTTA A
Upstream 100 bases:
>100_bases CTAATATTCTTTTTGTCTGAGATCCTGTTTATCTAAAAGCAGATTTCTTTTTGACTCATGTTTAAATATGACTCATGCAT ATTTTTTATCGGGATATTCT
Downstream 100 bases:
>100_bases GCATATATCATCCGGGTGTCTCTTTTTAAGAGATAACCCAAAAATTTTTTTACTTATTTCTTAAAATTTTTTATTATTCA CCTTTTCAAGCTAAATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYGIGSGGPGLFNSLIIAITFPI TGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVMLLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVL LPLVLIILLAVAVAVFVLSSTFSTLV
Sequences:
>Translated_186_residues MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYGIGSGGPGLFNSLIIAITFPI TGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVMLLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVL LPLVLIILLAVAVAVFVLSSTFSTLV >Mature_186_residues MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYGIGSGGPGLFNSLIIAITFPI TGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVMLLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVL LPLVLIILLAVAVAVFVLSSTFSTLV
Specific function: Unknown
COG id: COG2881
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20271; Mature: 20271
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYG CCHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGSGGPGLFNSLIIAITFPITGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVLLPLVLIILLAVAVAVFVLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFSTLV HHHHHC >Mature Secondary Structure MDYIETWKEVIQRPSNFYRKMPVTGGYAEPLTFAAISYLIYGLLSALFNREMIGDMYGYG CCHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGSGGPGLFNSLIIAITFPITGIISVLVGAAILYIIYKVLGGKGSYEGTVRFICYATAVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LLSWIPFIGWVFGFYGLYLYILGGMIVHDVSMVKSAIAVLLPLVLIILLAVAVAVFVLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFSTLV HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA