| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227384
Identifier: 21227384
GI number: 21227384
Start: 1517995
End: 1518363
Strand: Reverse
Name: 21227384
Synonym: MM_1282
Alternate gene names: NA
Gene position: 1518363-1517995 (Counterclockwise)
Preceding gene: 21227390
Following gene: 21227383
Centisome position: 37.07
GC content: 38.21
Gene sequence:
>369_bases ATGAGTGATACTGACAGCAGGGATATATTTGACTTTAAGCTTGAAAAGTGGGTTTTAGGTGCGGATGAATGTGCTTTTGC GAACCTGAGCGCTATAGGGAAGGACAAGCCTCTAAGTCAATATTTGATGGAGTCGATCGAAAACTGGGTAAATAAAGAAG AGGTATTTTTAACGGACAAATTCATTTCCGAAATGTGCGACTTTATAAAAAGTCAGGATGAAGACCTTTACGACCGTTTA ATGAAGAAATGTGCTTTAAAAGGAATAAGTGTGGGTGAAGGTATATTTGAAGCACTGAATTTATTGACCTGTGGGGCAGT AAGTGAACAGCAATGTAGAGAGATTAGAGATAACTCATGTGATGAGTAA
Upstream 100 bases:
>100_bases CGATGTCAATCATATATCTACTTAAATATCCATTTAATTATAAAAATCGCCTAAAATTGTTAAATATCATGAAGTCTCTT ATTTTTGTGGAGGATTACAT
Downstream 100 bases:
>100_bases CCTGGTCAGTCTCTCTAAATGTGCTTCTGTGAAGAATTTTACTAAATTTTATTATATCTTTTTTTGCGGTCTAATATTCT TTTTGTCTGAGATCCTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDKFISEMCDFIKSQDEDLYDRL MKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSCDE
Sequences:
>Translated_122_residues MSDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDKFISEMCDFIKSQDEDLYDRL MKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSCDE >Mature_121_residues SDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDKFISEMCDFIKSQDEDLYDRLM KKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSCDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13925; Mature: 13794
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDK CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHH FISEMCDFIKSQDEDLYDRLMKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSC HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC DE CC >Mature Secondary Structure SDTDSRDIFDFKLEKWVLGADECAFANLSAIGKDKPLSQYLMESIENWVNKEEVFLTDK CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHH FISEMCDFIKSQDEDLYDRLMKKCALKGISVGEGIFEALNLLTCGAVSEQQCREIRDNSC HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC DE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA