| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is aroA
Identifier: 21227340
GI number: 21227340
Start: 1465406
End: 1466698
Strand: Direct
Name: aroA
Synonym: MM_1238
Alternate gene names: 21227340
Gene position: 1465406-1466698 (Clockwise)
Preceding gene: 21227339
Following gene: 21227341
Centisome position: 35.77
GC content: 47.64
Gene sequence:
>1293_bases ATGCGCGCCTCAATTAGCAAATCCTCAATCAAAGGGGAGGTCTTTGCCCCTCCTTCAAAGAGTTACACCCACAGGGCTAT AACTCTCGCAGCCCTTTCAAAAGAATCGATCATTCACCGTCCCCTCCTTTCCGCTGATACTCTTGCTACAATCAGAGCTT CTGAGATGTTCGGAGCCGCGGTTAGACGGGAGAAAGAAAATCTCATCATCCAGGGATCTAATGGAAAGCCCGGTATTCCT GATGATGTAATTGATGCCGCAAATTCAGGGACAACCCTCCGCTTTATGACAGCAATAGCAGGCTTAACTGACGGAATCAC TGTACTTACAGGAGACTCATCTCTTCGCACGCGTCCAAACGGACCTCTTCTTGAAGTTCTCAACAGGCTGGGAGCAAAAG CCTGTTCTACGCGAGGAAACGAAAGAGCGCCTATTGTGGTCAAAGGAGGAATTAAGGGATCTGAAGTGGAAATAAGCGGC TCGATCAGCTCCCAGTTTATCTCTGCTCTTCTTATAGCCTGCCCGCTTGCTGAAAACAGCACCACTCTTTCCATTATAGG AAAACTGAAGTCAAGACCTTATGTTGACGTGACCATAGAAATGCTCGGGCTGGCAGGAGTCAAAATCCATACAGATGATA ATAACGGCACGAAATTTATCATCCCCGGAAAACAGAAATACGACCTGAAACAATACACGGTTCCCGGAGACTTTTCTTCT GCTTCCTACCTGCTAGCAGCTGCAGCCATGCTTGAAGGCTCCGAAATCACAGTCAAAAATCTATTCCCTTCAAAACAGGG AGATAAAGTGATTATTGATACTCTCAAACAGATGGGAGCAGACATAACATGGGACATGGAAGCTGGCATTGTGACCGTAA GAGGAGGAAGAAAATTAAAAGCCATTACCTTTGATGCCGGATCAACCCCTGACCTTGTACCGACTGTTGCCGTCCTTGCT TCAGTTGCCGAAGGGACCAGCAGAATAGAAAACGCCGAGCATGTCCGCTATAAAGAAACAGACCGGCTTCACGCCCTTGC GACCGAGCTTCCGAAAATGGGAGTCTCCCTCAAAGAAGAAATGGACAGCCTGACAATCACCGGAGGGACTCTTGAGGGAG CCGAAGTCCACGGCTGGGACGACCACCGGATTGTGATGTCTCTAGCTATAGCAGGCATGGTTGCAGGAAACACGATAGTT GACACCACTGAGTCTGTATCGATATCCTATCCTGATTTCTTTAAAGATATGCGAAACCTTGGAGCAAAAGTCAAGGAGAT TCCTGAAGAATAA
Upstream 100 bases:
>100_bases TTTCGCTCAAACTCAGCAGTCAACTGTTTCAAAAGGTAAAAAGAAAGCAGTCAAACTCAACAACACCCGGATTAAAAAAA TAGAAGAGCTCTGATTATAC
Downstream 100 bases:
>100_bases GTGAGATAAAAATTACTCTCCGCTCTGCCAAAGAAATCATTAGCCTTCTAAATGAATCTGAACCAGTTCAGGAATAATAA GGAATAATAAGAAATGACAT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MRASISKSSIKGEVFAPPSKSYTHRAITLAALSKESIIHRPLLSADTLATIRASEMFGAAVRREKENLIIQGSNGKPGIP DDVIDAANSGTTLRFMTAIAGLTDGITVLTGDSSLRTRPNGPLLEVLNRLGAKACSTRGNERAPIVVKGGIKGSEVEISG SISSQFISALLIACPLAENSTTLSIIGKLKSRPYVDVTIEMLGLAGVKIHTDDNNGTKFIIPGKQKYDLKQYTVPGDFSS ASYLLAAAAMLEGSEITVKNLFPSKQGDKVIIDTLKQMGADITWDMEAGIVTVRGGRKLKAITFDAGSTPDLVPTVAVLA SVAEGTSRIENAEHVRYKETDRLHALATELPKMGVSLKEEMDSLTITGGTLEGAEVHGWDDHRIVMSLAIAGMVAGNTIV DTTESVSISYPDFFKDMRNLGAKVKEIPEE
Sequences:
>Translated_430_residues MRASISKSSIKGEVFAPPSKSYTHRAITLAALSKESIIHRPLLSADTLATIRASEMFGAAVRREKENLIIQGSNGKPGIP DDVIDAANSGTTLRFMTAIAGLTDGITVLTGDSSLRTRPNGPLLEVLNRLGAKACSTRGNERAPIVVKGGIKGSEVEISG SISSQFISALLIACPLAENSTTLSIIGKLKSRPYVDVTIEMLGLAGVKIHTDDNNGTKFIIPGKQKYDLKQYTVPGDFSS ASYLLAAAAMLEGSEITVKNLFPSKQGDKVIIDTLKQMGADITWDMEAGIVTVRGGRKLKAITFDAGSTPDLVPTVAVLA SVAEGTSRIENAEHVRYKETDRLHALATELPKMGVSLKEEMDSLTITGGTLEGAEVHGWDDHRIVMSLAIAGMVAGNTIV DTTESVSISYPDFFKDMRNLGAKVKEIPEE >Mature_430_residues MRASISKSSIKGEVFAPPSKSYTHRAITLAALSKESIIHRPLLSADTLATIRASEMFGAAVRREKENLIIQGSNGKPGIP DDVIDAANSGTTLRFMTAIAGLTDGITVLTGDSSLRTRPNGPLLEVLNRLGAKACSTRGNERAPIVVKGGIKGSEVEISG SISSQFISALLIACPLAENSTTLSIIGKLKSRPYVDVTIEMLGLAGVKIHTDDNNGTKFIIPGKQKYDLKQYTVPGDFSS ASYLLAAAAMLEGSEITVKNLFPSKQGDKVIIDTLKQMGADITWDMEAGIVTVRGGRKLKAITFDAGSTPDLVPTVAVLA SVAEGTSRIENAEHVRYKETDRLHALATELPKMGVSLKEEMDSLTITGGTLEGAEVHGWDDHRIVMSLAIAGMVAGNTIV DTTESVSISYPDFFKDMRNLGAKVKEIPEE
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=333, Percent_Identity=36.6366366366366, Blast_Score=197, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320332, Length=420, Percent_Identity=33.3333333333333, Blast_Score=163, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_METMA (Q8PXI0)
Other databases:
- EMBL: AE008384 - RefSeq: NP_633262.1 - ProteinModelPortal: Q8PXI0 - SMR: Q8PXI0 - GeneID: 1479580 - GenomeReviews: AE008384_GR - KEGG: mma:MM_1238 - NMPDR: fig|192952.1.peg.1238 - HOGENOM: HBG646626 - OMA: YTTRYLL - ProtClustDB: PRK02427 - BioCyc: MMAZ192952:MM1238-MONOMER - BRENDA: 2.5.1.19 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 45798; Mature: 45798
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASISKSSIKGEVFAPPSKSYTHRAITLAALSKESIIHRPLLSADTLATIRASEMFGAA CCCCCCCHHCCCCEECCCCCCCCEEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHH VRREKENLIIQGSNGKPGIPDDVIDAANSGTTLRFMTAIAGLTDGITVLTGDSSLRTRPN HHCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEHHHHHHHCCCCCEEEEECCCCCCCCCC GPLLEVLNRLGAKACSTRGNERAPIVVKGGIKGSEVEISGSISSQFISALLIACPLAENS CHHHHHHHHHCHHHHHCCCCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCCCC TTLSIIGKLKSRPYVDVTIEMLGLAGVKIHTDDNNGTKFIIPGKQKYDLKQYTVPGDFSS CEEEEEEHHCCCCEEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCC ASYLLAAAAMLEGSEITVKNLFPSKQGDKVIIDTLKQMGADITWDMEAGIVTVRGGRKLK HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCEEE AITFDAGSTPDLVPTVAVLASVAEGTSRIENAEHVRYKETDRLHALATELPKMGVSLKEE EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHC MDSLTITGGTLEGAEVHGWDDHRIVMSLAIAGMVAGNTIVDTTESVSISYPDFFKDMRNL CCCEEEECCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHH GAKVKEIPEE CCHHHCCCCC >Mature Secondary Structure MRASISKSSIKGEVFAPPSKSYTHRAITLAALSKESIIHRPLLSADTLATIRASEMFGAA CCCCCCCHHCCCCEECCCCCCCCEEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHH VRREKENLIIQGSNGKPGIPDDVIDAANSGTTLRFMTAIAGLTDGITVLTGDSSLRTRPN HHCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEHHHHHHHCCCCCEEEEECCCCCCCCCC GPLLEVLNRLGAKACSTRGNERAPIVVKGGIKGSEVEISGSISSQFISALLIACPLAENS CHHHHHHHHHCHHHHHCCCCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCCCC TTLSIIGKLKSRPYVDVTIEMLGLAGVKIHTDDNNGTKFIIPGKQKYDLKQYTVPGDFSS CEEEEEEHHCCCCEEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCC ASYLLAAAAMLEGSEITVKNLFPSKQGDKVIIDTLKQMGADITWDMEAGIVTVRGGRKLK HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCEEE AITFDAGSTPDLVPTVAVLASVAEGTSRIENAEHVRYKETDRLHALATELPKMGVSLKEE EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHC MDSLTITGGTLEGAEVHGWDDHRIVMSLAIAGMVAGNTIVDTTESVSISYPDFFKDMRNL CCCEEEECCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECCHHHHHHHHHH GAKVKEIPEE CCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824