| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227341
Identifier: 21227341
GI number: 21227341
Start: 1466831
End: 1467811
Strand: Direct
Name: 21227341
Synonym: MM_1239
Alternate gene names: NA
Gene position: 1466831-1467811 (Clockwise)
Preceding gene: 21227340
Following gene: 21227347
Centisome position: 35.81
GC content: 36.8
Gene sequence:
>981_bases ATGGAAATAAAGTGCAGGTGCGGAGATAAATGTATAAAACCTGTTTCGGAAGTACTGAAAGACATTGAGTTATTCTACAA ACCATGCAGGGATTGCAAAACAGAAAAAATAAGAAAATTCTCTCCTCTGGCAGAACAGATTAACCTGGACGAAATAGATA ACCGTTTTGGAAATTGTAAATGCGGCAAAAGGCAGCTTGATATTGTAATGGCTCACGTGCTAAAAGTAATGATAGATGAA GGAATAAAAGATAAAAAAGCTAATTTAAGGAATGCATGTGTTCCTCTTATAACTCCTGGCTATCTAACTGATTATGTACC CTTTTTGCCTGAGAATTCTTTAGTAATATTATCCAGTGAAATGAATAAAGAATGTGCTGAGAGAGTTATAAAGGAAGTTC CGGAAGTTAAAGGAGTTTTAAAGGGAGATGCAAGAAAAACTGTGGGCATAAAAGACTCCGATTCCAGCCCCCATATATAT GAACTTCTTGCCGGATGCGATTTAAGATGTGATATTATACAGACTCCTTACGGTGCTTTAGGGATTTACAAATATCAGCA TGAAATCCACATAGAGTTTCCGCAGGTACACTCTCCGAAAATAGAAATACTTGAAAAAGCTTTGAAAGATTATAATAATC CTTCTGTTCTTGATTGCACATGCGGCCCCGGAAGTTTAGGAATCACATGCCTTAAAGCCGGCGCGCGAAAAGTTGTTTTT AATGATATATGGCACCCTGCAATAGAAACTACTTTGATTAATCTGGAAGCTAACGGGTTTCCGGTAAAATTCTCAGGCAG CGAAAAAGAATTAATAGCATCCGGAAACAACTTTGAAGTTTACAGTACGGATATAAGAGAATTAGTAAATTACCTGGATG AAAAATATGATATTTGTATCGTAGACACGTTTCCCGGTGTGGATACAGCAAAATTTATTGAAGCCGCAGGTAAATTAGGC AAAAATGTTGTTGTGATTTGA
Upstream 100 bases:
>100_bases GAAATCATTAGCCTTCTAAATGAATCTGAACCAGTTCAGGAATAATAAGGAATAATAAGAAATGACATAGTACTTATACA AAATATCCACAATTAAATAT
Downstream 100 bases:
>100_bases AATAGAAATATATGAGCCTGGAATGGAAAGCTGATGGTAGGAAATCGTGGATCAAGATATCAAGTGTAAAGGAAAATAGA CACACTTCTACTTTTTTTGA
Product: methyltransferase
Products: NA
Alternate protein names: RNA Methyltransferase Related Protein; RNA Methyltransferase-Like Protein; SAM-Dependent Methyltransferase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MEIKCRCGDKCIKPVSEVLKDIELFYKPCRDCKTEKIRKFSPLAEQINLDEIDNRFGNCKCGKRQLDIVMAHVLKVMIDE GIKDKKANLRNACVPLITPGYLTDYVPFLPENSLVILSSEMNKECAERVIKEVPEVKGVLKGDARKTVGIKDSDSSPHIY ELLAGCDLRCDIIQTPYGALGIYKYQHEIHIEFPQVHSPKIEILEKALKDYNNPSVLDCTCGPGSLGITCLKAGARKVVF NDIWHPAIETTLINLEANGFPVKFSGSEKELIASGNNFEVYSTDIRELVNYLDEKYDICIVDTFPGVDTAKFIEAAGKLG KNVVVI
Sequences:
>Translated_326_residues MEIKCRCGDKCIKPVSEVLKDIELFYKPCRDCKTEKIRKFSPLAEQINLDEIDNRFGNCKCGKRQLDIVMAHVLKVMIDE GIKDKKANLRNACVPLITPGYLTDYVPFLPENSLVILSSEMNKECAERVIKEVPEVKGVLKGDARKTVGIKDSDSSPHIY ELLAGCDLRCDIIQTPYGALGIYKYQHEIHIEFPQVHSPKIEILEKALKDYNNPSVLDCTCGPGSLGITCLKAGARKVVF NDIWHPAIETTLINLEANGFPVKFSGSEKELIASGNNFEVYSTDIRELVNYLDEKYDICIVDTFPGVDTAKFIEAAGKLG KNVVVI >Mature_326_residues MEIKCRCGDKCIKPVSEVLKDIELFYKPCRDCKTEKIRKFSPLAEQINLDEIDNRFGNCKCGKRQLDIVMAHVLKVMIDE GIKDKKANLRNACVPLITPGYLTDYVPFLPENSLVILSSEMNKECAERVIKEVPEVKGVLKGDARKTVGIKDSDSSPHIY ELLAGCDLRCDIIQTPYGALGIYKYQHEIHIEFPQVHSPKIEILEKALKDYNNPSVLDCTCGPGSLGITCLKAGARKVVF NDIWHPAIETTLINLEANGFPVKFSGSEKELIASGNNFEVYSTDIRELVNYLDEKYDICIVDTFPGVDTAKFIEAAGKLG KNVVVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36420; Mature: 36420
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKCRCGDKCIKPVSEVLKDIELFYKPCRDCKTEKIRKFSPLAEQINLDEIDNRFGNCK CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCC CGKRQLDIVMAHVLKVMIDEGIKDKKANLRNACVPLITPGYLTDYVPFLPENSLVILSSE CCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCCCCEECCCHHHHCCCCCCCCCEEEEECC MNKECAERVIKEVPEVKGVLKGDARKTVGIKDSDSSPHIYELLAGCDLRCDIIQTPYGAL CCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHH GIYKYQHEIHIEFPQVHSPKIEILEKALKDYNNPSVLDCTCGPGSLGITCLKAGARKVVF EEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCHHH NDIWHPAIETTLINLEANGFPVKFSGSEKELIASGNNFEVYSTDIRELVNYLDEKYDICI HHHCCHHHHEEEEEEECCCEEEEECCCCCCEEECCCCEEEEHHHHHHHHHHHCCCCCEEE VDTFPGVDTAKFIEAAGKLGKNVVVI EECCCCCCHHHHHHHHHHCCCCEEEC >Mature Secondary Structure MEIKCRCGDKCIKPVSEVLKDIELFYKPCRDCKTEKIRKFSPLAEQINLDEIDNRFGNCK CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCC CGKRQLDIVMAHVLKVMIDEGIKDKKANLRNACVPLITPGYLTDYVPFLPENSLVILSSE CCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCCCCEECCCHHHHCCCCCCCCCEEEEECC MNKECAERVIKEVPEVKGVLKGDARKTVGIKDSDSSPHIYELLAGCDLRCDIIQTPYGAL CCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHH GIYKYQHEIHIEFPQVHSPKIEILEKALKDYNNPSVLDCTCGPGSLGITCLKAGARKVVF EEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCHHH NDIWHPAIETTLINLEANGFPVKFSGSEKELIASGNNFEVYSTDIRELVNYLDEKYDICI HHHCCHHHHEEEEEEECCCEEEEECCCCCCEEECCCCEEEEHHHHHHHHHHHCCCCCEEE VDTFPGVDTAKFIEAAGKLGKNVVVI EECCCCCCHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA