| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mtnU [H]
Identifier: 21227331
GI number: 21227331
Start: 1456477
End: 1457400
Strand: Reverse
Name: mtnU [H]
Synonym: MM_1229
Alternate gene names: 21227331
Gene position: 1457400-1456477 (Counterclockwise)
Preceding gene: 21227332
Following gene: 21227326
Centisome position: 35.58
GC content: 43.4
Gene sequence:
>924_bases ATGAGGTACTTAAACAAATTACTTAAACAAAGTACTCAAACACAGTACTTAAACAAAGTACTGAAGTATCTGGTAGATCT GCATTTACAATTAAAAGGAAGGGAAGTGACCTCTATTATAACCGCCTGTATCCAGATGAATATTTCACCCTGCTCGAAGC ATGAAAATCTTGATCACGCCCTTTCCCTGGCAGAAGAAGCAGTTTCAAAAGAAGCAGAGTTGCTTGTCTTTCCGGAAGTT TTCTCAACCGGTTTTTGTTATGAGCGCATAGAAGAAGTGGCTGAAACCGTTTCAGGTCCCACTATTGAGGCTCTCAGTGA CTTTTCCAGAGAATATGGCTGTATCCTTGCGGGCTCAATGATAGAAAAGAGAGAAATAAAGGATAAGGGGGCAATAAGTC CGGAAAAAAGAGCTCCTTATCAATATAACCTCGGTTTCTGTATCGAATCCGGAAAACTTGCAGGCATCCGCAGAAAAGTC CAGCTTTACGGTCCCGAAAAAAAATATTTTGCGTCCGGAGACAGTATAGCCCCTATCAGGCTGCAAAAATACAGCCTCTC ACTGGGACTTATAGTCTGCAATGAACTCAGGTATCCTGAAGTTGCCCGAAAAATGACTCTTGATGGAGCAGACCTTCTGG TCTCAGCTGCCGAAATTCCGGATTTTTACATATATCCCTGGCGTATCATGTCAATCTCCAGGGCAATAGAAAATCAACTG CCGCATATTGCATGTAACAGGGTTGGAAAAGACAGGTATTCTACTTATCCGGGGAGCTCCTTTATTACTGATGGCTGGGG CCGCATTCTGGCAAAGGCTGGAAAAGAAGAGTGTGTTATTCTGGGGGAAATTGACCTTGACGAGGCAAGAAAAATCAGAC AAACCGGCTCTATTCTCGAAGACCGCAGGCCTGACCTTTATTAA
Upstream 100 bases:
>100_bases TTTTGTCCTACCGCCCTGCTCCACTGTCTCATTCTACTGTCATCTCAAATCGTAGTCTTAAACAGGAAAATTGAATATTA CTGCAGAATAGAATTACCTC
Downstream 100 bases:
>100_bases CCGTTAAAAAAGTAGTTAAAAAGGTGAACCCTGCCGGGTTACCCTTTAAGTTCCTTTACAATCAGTTCACGGGCTGTCTT TGCGTCCGCCGTGCCTTTTG
Product: Nitrilase
Products: carboxylate; NH3
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MRYLNKLLKQSTQTQYLNKVLKYLVDLHLQLKGREVTSIITACIQMNISPCSKHENLDHALSLAEEAVSKEAELLVFPEV FSTGFCYERIEEVAETVSGPTIEALSDFSREYGCILAGSMIEKREIKDKGAISPEKRAPYQYNLGFCIESGKLAGIRRKV QLYGPEKKYFASGDSIAPIRLQKYSLSLGLIVCNELRYPEVARKMTLDGADLLVSAAEIPDFYIYPWRIMSISRAIENQL PHIACNRVGKDRYSTYPGSSFITDGWGRILAKAGKEECVILGEIDLDEARKIRQTGSILEDRRPDLY
Sequences:
>Translated_307_residues MRYLNKLLKQSTQTQYLNKVLKYLVDLHLQLKGREVTSIITACIQMNISPCSKHENLDHALSLAEEAVSKEAELLVFPEV FSTGFCYERIEEVAETVSGPTIEALSDFSREYGCILAGSMIEKREIKDKGAISPEKRAPYQYNLGFCIESGKLAGIRRKV QLYGPEKKYFASGDSIAPIRLQKYSLSLGLIVCNELRYPEVARKMTLDGADLLVSAAEIPDFYIYPWRIMSISRAIENQL PHIACNRVGKDRYSTYPGSSFITDGWGRILAKAGKEECVILGEIDLDEARKIRQTGSILEDRRPDLY >Mature_307_residues MRYLNKLLKQSTQTQYLNKVLKYLVDLHLQLKGREVTSIITACIQMNISPCSKHENLDHALSLAEEAVSKEAELLVFPEV FSTGFCYERIEEVAETVSGPTIEALSDFSREYGCILAGSMIEKREIKDKGAISPEKRAPYQYNLGFCIESGKLAGIRRKV QLYGPEKKYFASGDSIAPIRLQKYSLSLGLIVCNELRYPEVARKMTLDGADLLVSAAEIPDFYIYPWRIMSISRAIENQL PHIACNRVGKDRYSTYPGSSFITDGWGRILAKAGKEECVILGEIDLDEARKIRQTGSILEDRRPDLY
Specific function: May be involved in a regulatory step in the methylthioribose (MTR) recycling pathway [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=286, Percent_Identity=29.020979020979, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI297632348, Length=284, Percent_Identity=25.3521126760563, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI5031947, Length=284, Percent_Identity=25.3521126760563, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI297632350, Length=284, Percent_Identity=25.3521126760563, Blast_Score=75, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323383, Length=286, Percent_Identity=25.5244755244755, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI21355835, Length=268, Percent_Identity=24.2537313432836, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI17933642, Length=308, Percent_Identity=26.2987012987013, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 3.5.5.1
Molecular weight: Translated: 34662; Mature: 34662
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLNKLLKQSTQTQYLNKVLKYLVDLHLQLKGREVTSIITACIQMNISPCSKHENLDHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCHHHH LSLAEEAVSKEAELLVFPEVFSTGFCYERIEEVAETVSGPTIEALSDFSREYGCILAGSM HHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECHH IEKREIKDKGAISPEKRAPYQYNLGFCIESGKLAGIRRKVQLYGPEKKYFASGDSIAPIR HHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCCHHHEEEEECCCHHEECCCCCCCCEE LQKYSLSLGLIVCNELRYPEVARKMTLDGADLLVSAAEIPDFYIYPWRIMSISRAIENQL EEEEEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHCC PHIACNRVGKDRYSTYPGSSFITDGWGRILAKAGKEECVILGEIDLDEARKIRQTGSILE CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH DRRPDLY CCCCCCC >Mature Secondary Structure MRYLNKLLKQSTQTQYLNKVLKYLVDLHLQLKGREVTSIITACIQMNISPCSKHENLDHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCHHHH LSLAEEAVSKEAELLVFPEVFSTGFCYERIEEVAETVSGPTIEALSDFSREYGCILAGSM HHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECHH IEKREIKDKGAISPEKRAPYQYNLGFCIESGKLAGIRRKVQLYGPEKKYFASGDSIAPIR HHHHHHHHCCCCCCCCCCCEEECCEEEEECCCCCCHHHEEEEECCCHHEECCCCCCCCEE LQKYSLSLGLIVCNELRYPEVARKMTLDGADLLVSAAEIPDFYIYPWRIMSISRAIENQL EEEEEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHCC PHIACNRVGKDRYSTYPGSSFITDGWGRILAKAGKEECVILGEIDLDEARKIRQTGSILE CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH DRRPDLY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitrile; H2O
Specific reaction: A nitrile + H2O = a carboxylate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 12022921 [H]